| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0093 |
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| Symbol | |
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| ID | 4172865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 107394 |
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| End bp | 107906 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053092 |
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| Product | HxlR family transcriptional regulator |
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| Protein accession | YP_659679 |
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| Protein GI | 109896424 |
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| COG category | [K] Transcription |
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| COG ID | [COG1733] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATGGA GCCAAATAAA CGAGCAATCT TGCTCTATCG CGCGTTCAGC TGCGATATTC
GGCGATCGCT GGACACTGCT TATCCTCAGA GATATCTTTT GGAAAGTCAC TAAGTTTTCC
GAATTGCAGA AATCATTAGG GATAACCAAG CATCGCCTAT CTGACCGCCT CAATCGTTTA
GTCGATTCAG GGGTACTGTA TAAAGACTTA TATGATGAAA ACAGACAACA CTTTGAATAT
AAGCTTACCG AGAAGGGCCT TGACCTCTAC CCTATCATGC TGGCGATTGT CCACTGGGGA
GACAAGTGGG AGGGAGATCT GGATGGCCCT CCTGTTCATT ATTTTCATAC GACTTGTGGC
GAAGCTGGCA CAGCACATGT AGCTTGCTCG ATATGTGGGG AGGCCATGAA TGTGAATAAT
ACCTCAGGAG CGTTAGGGGC AGGCATTTTA AACAAAGTGG AAAGAGGGGA AGAAACCGGC
ATTAAACTTG ATATTTACGC CGGTAATTCG TGA
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| Protein sequence | MKWSQINEQS CSIARSAAIF GDRWTLLILR DIFWKVTKFS ELQKSLGITK HRLSDRLNRL
VDSGVLYKDL YDENRQHFEY KLTEKGLDLY PIMLAIVHWG DKWEGDLDGP PVHYFHTTCG
EAGTAHVACS ICGEAMNVNN TSGALGAGIL NKVERGEETG IKLDIYAGNS
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