Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_2136 |
Symbol | |
ID | 5055873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 1910820 |
End bp | 1912148 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640469688 |
Product | periplasmic binding protein |
Protein accession | YP_001154334 |
Protein GI | 145592332 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGTTGT CAAAAGAGTT CCTGGTAGCG TCGGCGGCAT TTGCGCTTTC GATTATTGCT TTGGCAATAG CGGTACAGGC CTTGGGGCAG TTATCATCGT CGCTAATCTC TCTCAAGGCA GATGTCACCG ACAAGTTAAA TATCCTGGAG AAAAAGGTGG GAGAGCTTCA GCAACAGTTA AGCATATCCA CGAGCGAACT CAGAGGTTCT CTTCAGAGCG AAATCTCCGG CGTTAACAAA ACTTTGTCTG AGCTTAGGCA GGAAGTGACG CTTCTTAGGC GTGTGGCGTC TATGCCCTCT GGCCAAGTGT CTGTCAAATA CGCCAGCTTT TACCTGGCTT ACGAGGGCGG GGCCTACCTT CTTAAGGACT CCATGGGACG GAGAGTTTTG CTACTGCCAC GGGGGATTGA AGCGCCTCTT GCCTCGTATC TAGAAGCGAA GTATAGACCC GACCTCGTTG TGATTTACCC AGTAGAGAGG GCTGTTTTTA TGGCCGCTAC CCAAGTTGCC ATGGTCTACC GGCTGTATAA CGAGACTGGG GACCCGCGCT TCTTGAGGTC AATCGCCGGC ATTATGTGGG GCAGGGACTA CGAGTGGTAT CTCCCCGAGG TTAAGGCCAT GCTCCAAAAC GGCACTATAA AAGACGTCGG ATCTGCCTAT TCTCCAAACT ACGAGGCCAT ATTGGCCCTG AAGCCCGATG TTGTCTTCGT ATACTTCTCC CCCGGCCCCT ACGGCACAGA GGCCGTAATT CAAAGGCTTC AACAGCTGGG CGTCCCCTAC GTCGTCGTGA ATGAGTTCAA CGAGAGGAGC CCCCTGGGGA GGTTCGAATG GGTCAAGGCA GTAGCCGCGT TTTTCAACGC GACGGACAAG GCAGTTGCGG TATTCAACAA GGTGGAGGCG AGGTGGGACC AGCTGGCGTC CTTAGCCGCG GATTTAGACA GGCCGAGGGT GGCGTGGTTT ATCATATACC AAGGCATTCT ATACCCCGCA GGTCCGGCGG TAAGGGAGCT AATAAGACTG GCGGGGGGCA GATACGCCTA TGCCAACTAC AGCCGGGTTG ACCTCGAAGT CGTGTTGAAG CACAGAAACG ACGTTGACGT GCTCATATGG TCGGGTTACG GCGTGTCAAA GATAGAGGAC ATAGTGAAGA TAGAGCCGAG ACTCAAGGAA CTTAGGCCAG TCGTGACTGG CAGGGTGTAC GCATACAGCC CCGCCTTTTA CCAGCTGTCC AACGCCTACC CAGAGCGCGT CCTTGAAGAG CTCGTGTCGA TAATACACCC CGAGATCTCT CCGCCGGGTA GGCTAACGCT CTTCATCCAG TTGCAGTGA
|
Protein sequence | MQLSKEFLVA SAAFALSIIA LAIAVQALGQ LSSSLISLKA DVTDKLNILE KKVGELQQQL SISTSELRGS LQSEISGVNK TLSELRQEVT LLRRVASMPS GQVSVKYASF YLAYEGGAYL LKDSMGRRVL LLPRGIEAPL ASYLEAKYRP DLVVIYPVER AVFMAATQVA MVYRLYNETG DPRFLRSIAG IMWGRDYEWY LPEVKAMLQN GTIKDVGSAY SPNYEAILAL KPDVVFVYFS PGPYGTEAVI QRLQQLGVPY VVVNEFNERS PLGRFEWVKA VAAFFNATDK AVAVFNKVEA RWDQLASLAA DLDRPRVAWF IIYQGILYPA GPAVRELIRL AGGRYAYANY SRVDLEVVLK HRNDVDVLIW SGYGVSKIED IVKIEPRLKE LRPVVTGRVY AYSPAFYQLS NAYPERVLEE LVSIIHPEIS PPGRLTLFIQ LQ
|
| |