| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1936 |
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| Symbol | |
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| ID | 5054955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 1739948 |
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| End bp | 1740646 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640469482 |
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| Product | exosome complex RNA-binding protein Rrp4 |
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| Protein accession | YP_001154135 |
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| Protein GI | 145592133 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1097] RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACTTCG TAACTCCCAG ACAACTGATA TTTCCGGGAG ACGTAATCGC GACGGCGGAC
AAGAAAGTGG AGGGTCCCGT GTATCTAGAC AACGGCCGGT ACAGAAGTCT AGTTGTGGGG
CTTGTGGAGT TTAGAGAGGA CTCCGTGGTG ATAGTCCCTC TTGAGGGCAC TTACCGGCCG
AAGAAAGGCG ATGTGGTGGT GGGCTACGTT ACCGACGTCT TGGCCACAGG CTGGGAAGTG
GATGTGAGGT CCTTCATGCC GGCGTACCTC CCCGTGAGCG AGGCTCTCCA CAAGCACGTG
GATTTGGAGA CTACTCCTCT TACCACGTTC CTCAATGTGG GGGATGTAAT CGTGGCAAAG
GTAAAGGACG TAGACCTAAC CGACGAGTAC CCAATTGTGT TGACCCTCCG CGAAGAGAAA
GTCGGCAAGG TGGAGAGCGG CACTGTTGTC GATATAGCAC CTGTAAAAAT ACCGCGAGTC
ATAGGTAAGA AGGGCACCAT GCTAAACACG CTACTGGAAC TAGGATGCGA CATCGTAGTG
GGGCAAAATG GCCGTATTTG GATCAAGTGT GGCGACCCCC GAGACGAAGT TTTCCTAGCC
TCTCTCATCA GAAAAATCGA GCTGGAGAGT CACGTCATGG GCCTAACCGA CAGGGTAAAG
TCAGAAATAG AGAAGTACAA GGAAAGCAAA CAGAAGTAA
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| Protein sequence | MYFVTPRQLI FPGDVIATAD KKVEGPVYLD NGRYRSLVVG LVEFREDSVV IVPLEGTYRP
KKGDVVVGYV TDVLATGWEV DVRSFMPAYL PVSEALHKHV DLETTPLTTF LNVGDVIVAK
VKDVDLTDEY PIVLTLREEK VGKVESGTVV DIAPVKIPRV IGKKGTMLNT LLELGCDIVV
GQNGRIWIKC GDPRDEVFLA SLIRKIELES HVMGLTDRVK SEIEKYKESK QK
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