Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1747 |
Symbol | |
ID | 5055059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 1570351 |
End bp | 1571100 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640469290 |
Product | GTPase |
Protein accession | YP_001153950 |
Protein GI | 145591948 |
COG category | [R] General function prediction only |
COG ID | [COG1100] GTPase SAR1 and related small G proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0217761 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00298342 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTATACTA TTTTCTTTAT TGGCACAGCC GGCTCGGGGA AGTCCTCGTT GGTATCGGCT TTGTCCAATT GGATGGAGGA ACAAGGCCTC GACGTAGGAA TCATCAACTT GGACCCAGCC GCCGAATATC TCCCCTATGT GCCCGACATA GACATAAGGG ACAGGATAAG CGCCAGGAAG GTGATGAAGC AGTACAAGCT CGGCCCCAAC GCGTCGATAA TTGCCGCCGT TGACATGGTA GTGACTGAGG CGGAGAGAAT AAAGGAGGAA ATGGAGGTGG TCGGCGCGCC TATCTACTTG ATAGACACGC CAGGCCAGAT GGAGCTATTC GCCTTTAGGC AAAGCGGCGC CTACTTGATA CAGAAGTTGT CCGACGTGCA CACGCTTGTT GTATACGTCT CAGATGCTGT ATATGTACAG AGCGTCGACG GCTTCGCCAC GACCATGTTG CTGGCCCTCT CTAGCAGAAT TAGGTTCAAG AAGCCGCAGA TACTTGTGGT GAATAAAGCT GATTTAATAA CGGAAGAGAC ACAGGCAAAC ATCATAAACT GGACAGAAGA TCCCGAGACG CTCCTAGAGT CTATGGATCT TCCCAACTAC GAGAAGGAGA TTCTGAGATC GGTAGCAAAT ATGGGAGGAT TTGTAGAGCC TATCTTCGTA TCGGCAAAGA CTGGAGAAGG GCTGGATAAG CTCTACTACC AGCTACAAAT CCACTACACC GGAGGAGAAG ACGCTCAGCT CCCTCCCTGA
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Protein sequence | MYTIFFIGTA GSGKSSLVSA LSNWMEEQGL DVGIINLDPA AEYLPYVPDI DIRDRISARK VMKQYKLGPN ASIIAAVDMV VTEAERIKEE MEVVGAPIYL IDTPGQMELF AFRQSGAYLI QKLSDVHTLV VYVSDAVYVQ SVDGFATTML LALSSRIRFK KPQILVVNKA DLITEETQAN IINWTEDPET LLESMDLPNY EKEILRSVAN MGGFVEPIFV SAKTGEGLDK LYYQLQIHYT GGEDAQLPP
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