Gene Pars_1747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1747 
Symbol 
ID5055059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1570351 
End bp1571100 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content51% 
IMG OID640469290 
ProductGTPase 
Protein accessionYP_001153950 
Protein GI145591948 
COG category[R] General function prediction only 
COG ID[COG1100] GTPase SAR1 and related small G proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0217761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00298342 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTATACTA TTTTCTTTAT TGGCACAGCC GGCTCGGGGA AGTCCTCGTT GGTATCGGCT 
TTGTCCAATT GGATGGAGGA ACAAGGCCTC GACGTAGGAA TCATCAACTT GGACCCAGCC
GCCGAATATC TCCCCTATGT GCCCGACATA GACATAAGGG ACAGGATAAG CGCCAGGAAG
GTGATGAAGC AGTACAAGCT CGGCCCCAAC GCGTCGATAA TTGCCGCCGT TGACATGGTA
GTGACTGAGG CGGAGAGAAT AAAGGAGGAA ATGGAGGTGG TCGGCGCGCC TATCTACTTG
ATAGACACGC CAGGCCAGAT GGAGCTATTC GCCTTTAGGC AAAGCGGCGC CTACTTGATA
CAGAAGTTGT CCGACGTGCA CACGCTTGTT GTATACGTCT CAGATGCTGT ATATGTACAG
AGCGTCGACG GCTTCGCCAC GACCATGTTG CTGGCCCTCT CTAGCAGAAT TAGGTTCAAG
AAGCCGCAGA TACTTGTGGT GAATAAAGCT GATTTAATAA CGGAAGAGAC ACAGGCAAAC
ATCATAAACT GGACAGAAGA TCCCGAGACG CTCCTAGAGT CTATGGATCT TCCCAACTAC
GAGAAGGAGA TTCTGAGATC GGTAGCAAAT ATGGGAGGAT TTGTAGAGCC TATCTTCGTA
TCGGCAAAGA CTGGAGAAGG GCTGGATAAG CTCTACTACC AGCTACAAAT CCACTACACC
GGAGGAGAAG ACGCTCAGCT CCCTCCCTGA
 
Protein sequence
MYTIFFIGTA GSGKSSLVSA LSNWMEEQGL DVGIINLDPA AEYLPYVPDI DIRDRISARK 
VMKQYKLGPN ASIIAAVDMV VTEAERIKEE MEVVGAPIYL IDTPGQMELF AFRQSGAYLI
QKLSDVHTLV VYVSDAVYVQ SVDGFATTML LALSSRIRFK KPQILVVNKA DLITEETQAN
IINWTEDPET LLESMDLPNY EKEILRSVAN MGGFVEPIFV SAKTGEGLDK LYYQLQIHYT
GGEDAQLPP