Gene Pars_1614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1614 
Symbol 
ID5056421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1456247 
End bp1456585 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content49% 
IMG OID640469155 
ProductPilT domain-containing protein 
Protein accessionYP_001153820 
Protein GI145591818 
COG category[R] General function prediction only 
COG ID[COG1412] Uncharacterized proteins of PilT N-term./Vapc superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACTTG TATTGGACAC GTCTGCTGTT ATCTACATAA TTGAGAAGAA GATAGACGCG 
ACGCAACTTC TTGAGCACGA AATCCACATA CCCATAGCCG TAGTTGAAGA AATGCAGAAA
ATATCTGTAA AGAATAGGCG GGCCAGGGTA GCCCTTCAGT TGCTTGAAAT ATTGCGACCC
ACCCTACACA AAAAAAGAGG GCCTGCAGAC CGCGCTGTGC TGGAACTCGC TAAAGAACTT
GGCGCAGTTC TGGTGACAGG CGATGAGGCC CTAGCCGAGA GGGCAAGACA GGAGGGAGTC
GCAGTAGGTA AGTTCCACAA AGGTCAGCTG GTCGTATAA
 
Protein sequence
MKLVLDTSAV IYIIEKKIDA TQLLEHEIHI PIAVVEEMQK ISVKNRRARV ALQLLEILRP 
TLHKKRGPAD RAVLELAKEL GAVLVTGDEA LAERARQEGV AVGKFHKGQL VV