Gene Pars_1408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1408 
Symbol 
ID5054920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1270516 
End bp1271205 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content56% 
IMG OID640468951 
ProductpaREP7 
Protein accessionYP_001153620 
Protein GI145591618 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.165903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.389588 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGTTGA AGGAGGAGCT TCTGAGGCTG TTGCGCGAGG ACGAGGAGTT TAGGTACGCG 
GTGGCCGGCT TGCTGGGGCT GGGCGAGGTG TTGGCCGAGC TGAAGAGGTT AAGGGAGGAC
TTCAACAAGT TTGTAGAGGA GAGCCAGAGG CGGTGGGAGG AGAACAACAG GCGCTGGGAA
GAAAACAACA AGAAGTGGGA GGAAAATGAG AAGCGCTGGG AGGCGAATTG GAGGCGGTGG
GAGGAGAATG AGAAGCGCTG GGCGGAGTGG TTTGAGACGT GGAAAAAGTT CCTAGAAGAT
TATTTCAACT TTAAAAGCGA GGTGAACAAG CGGTTCTCTA GACTTGAGGA GAATTTGGGG
GCGTTGACAG AGGCAGTTTA CACGCGCTAT GTTTGGGAGG ACCTCTCAAC AGAGCTTAGG
GCCTCGGGGG AAGCCGTAGT TAGGCGTATT AGAAACGCCG AGTTTGACGG GGTCGAGGTG
GACCTCCTGG TGGAGACTGA GAAGAGGGTA TACGTAGTGG AGGTGAAGGT AAGGCCGAGG
ATTGACGACG TGGGAGCTCT TCTGGCAAAA GCCGAGGTTG TGGGTAGCCA GGTAGGCAAG
CCGGTCGTCC CAGTGCTGGC CGGGTCGTAC GTGGGGAGGG AGGTGGAGGC ATACGCAAGG
GGCAAGGGGG TGTTAGTCTT TACGTACTGA
 
Protein sequence
MGLKEELLRL LREDEEFRYA VAGLLGLGEV LAELKRLRED FNKFVEESQR RWEENNRRWE 
ENNKKWEENE KRWEANWRRW EENEKRWAEW FETWKKFLED YFNFKSEVNK RFSRLEENLG
ALTEAVYTRY VWEDLSTELR ASGEAVVRRI RNAEFDGVEV DLLVETEKRV YVVEVKVRPR
IDDVGALLAK AEVVGSQVGK PVVPVLAGSY VGREVEAYAR GKGVLVFTY