Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1183 |
Symbol | |
ID | 5055859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | - |
Start bp | 1071731 |
End bp | 1072369 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640468733 |
Product | lipoate-protein ligase B |
Protein accession | YP_001153406 |
Protein GI | 145591404 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0321] Lipoate-protein ligase B |
TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.191181 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0501613 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGATCT TCATCCTAGG GAGGACCAAA TACCAGGAGG CTTGGGCGTT GATGAAGAGG ATACACGACG AAGTCGCGAG TGGGGTCTCC GAGGAGATGA TCCTAGTTAC GGAGCACGAC CACGTCATCA CGGTGGGGCG GCACGGCAGG CTCAACAACG TCTTGCGCAG GGAGTTGCCC ATATACGTGG TGGAGAGAGG CGGCGACGCC ACGTACCACG GCCCCGGCCA AGCCGTTGTG TACCCCGTGG TGAGACTCAG AGGAGGGGTT AGGAGCTACC TCTGGGCGCT CGAGGAGGCC GTCATCCGGA CCCTTGACAA GTACGGCATA TCGGCCGGCC GCCGCGAGGA CCACAGAGGG GTCTGGGTCG GCGGCAAGAA GATAGCCAGC GTCGGGATAG CGGTGGAGCG CGGAGTTGCC TACCACGGCG TCGCCGTATA TGTGAACCCG CACATGGAGT ACTTCTACCA CATAAACCCC TGCGGGCTTC CGCCGTCTGT CATCACGTCC ATGAGGCAGC TCGGCGTCGA GGCCGACGTC TTCGAGGTGG GATACGCAGT TGCCGCCAAC CTAGAGACCT TGCTACAACG ACAAGAGCGG TTGAAAACTC GTTGCGAATC GCTGAGGCGC ATCCCTTAG
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Protein sequence | MRIFILGRTK YQEAWALMKR IHDEVASGVS EEMILVTEHD HVITVGRHGR LNNVLRRELP IYVVERGGDA TYHGPGQAVV YPVVRLRGGV RSYLWALEEA VIRTLDKYGI SAGRREDHRG VWVGGKKIAS VGIAVERGVA YHGVAVYVNP HMEYFYHINP CGLPPSVITS MRQLGVEADV FEVGYAVAAN LETLLQRQER LKTRCESLRR IP
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