| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1107 |
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| Symbol | |
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| ID | 5054964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | - |
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| Start bp | 993203 |
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| End bp | 994708 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640468663 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001153337 |
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| Protein GI | 145591335 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.192889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.929287 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACGA AGACAAGAAA TGTGGTAATT GCGTTGGTGG CTGTTTTAAT TATCGCCGTG
GGGGCTTTTC TGGTTTTGCA AAGCCCCTCG CAACAGCCGC AGAAGACGCA GACATCGTCT
GCTCAGCCTT CTTCTACTTC GTCGGCTCAG CCTGGGCTGA GCGGGTCTCT GACTATTTTG
GTGCCGACAG GAGACCCCAC GCTTATGCCC TACATACAGC TCGCCGCGGG GGAGTTTATG
AAGAGGTATC CTGGGGTGAA GATAACTATA CAGCCTGTGC CTTTTGGCCA GATGGTGCAG
ACGGCCTTGA CGGCTTTGCA GAATAAAAAC CCCGACCCTG CTCTTATTAT CTTCTACCCG
TCGCAAGCGT CTACGCTTGG GCCTTATCTA ATGGATCTAC GGCCCTATCT CAGCTCTGGG
GTTCTCAACA AGTCGGATAT CCCCACCAGC GCTATGTTGT CTGTCATGAT GGTTGCCAAG
AACGGGACAG TTACGAAGAT CTTCGGCGTG CCTTTCCAGA TGGTGTTTGG GTACGTGCTG
GTGTATAGGA AGTCTATTTT TAACAACCCA GCACTTCAGT CCGAGTTTAG GCAAAAATAC
GGCTTCGACC TGGATCCCCT TACCTGGTCT TCGTGGGATC AGTTTGTCAG CGCCGCTGAG
TTCCTCCAGT CGAAGCAAGT GGCTAAGTAC GCGTTGCTGT TCCCAGATGG CTTGCAACAG
TCTATTTTCA ACGGTTTTAT TATGGTGTTC TACACCTATG CCCTTAATGA TCCGTGTGTA
GGCATCCCGG CCGACGTGGC GAAGGGCGCC GTTCCCACCC AGGGCTATTG GGCCTACTTC
CGCTACACGC CGGATGGCTC TGTGAACATC ACCGTGGGTT GTCCGTCTTT CTTACAAGCG
CTTAGGGCGT ATAAAAAGCT CGTGCAGTTC CAGCCGCCTA TCACCGTCCA GGCTATGGAG
TACGACCAGC TTCGGGACCT CTTCTTGACA GGTGACTACG CCATGGTGGC TGCCTGGACC
AGCTTCATAC CTATCTACAA CAACGCCTCG GTTTCCAAGG TGGCGGGGGA CATCGCCATA
TCGCCGCTTC CGGGGGGTAA ATACCCATTT GGCACTGGGC TTGCCCCCAC GTTTATCGGC
GTTAACCCAT ATGCGAAGGA TCCCGACTTG GCGGTGCGGT TCGTGGCTTT CTTGATGTCG
CCGGAGATGT ACAGACTCGG CGCCGAGAAG GTGGGGTTTG TGCCGGCTAC TTTGAGCGGG
ATTAGGGCCG CCTCCCAAGT GCCTTCTATG AGCTGGCTCG CGCCGTTTGT GCCGCTGTTG
CAGGCCGGCG CCGCTTTAAG CGATATTCAG CGGCTTACGT TGGTCAATAG GGTTACCAAC
TTCTTTACTG ATATGCGGCC CTACTTCATC AACCAGGTGG CTAGTTATCT CAGAGGCGAG
CAAGACGCCG AGACTACGCA GATGAACATA TACAAGACGT GGAAGAGCAT TATGAAAATT
TCATGA
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| Protein sequence | MATKTRNVVI ALVAVLIIAV GAFLVLQSPS QQPQKTQTSS AQPSSTSSAQ PGLSGSLTIL
VPTGDPTLMP YIQLAAGEFM KRYPGVKITI QPVPFGQMVQ TALTALQNKN PDPALIIFYP
SQASTLGPYL MDLRPYLSSG VLNKSDIPTS AMLSVMMVAK NGTVTKIFGV PFQMVFGYVL
VYRKSIFNNP ALQSEFRQKY GFDLDPLTWS SWDQFVSAAE FLQSKQVAKY ALLFPDGLQQ
SIFNGFIMVF YTYALNDPCV GIPADVAKGA VPTQGYWAYF RYTPDGSVNI TVGCPSFLQA
LRAYKKLVQF QPPITVQAME YDQLRDLFLT GDYAMVAAWT SFIPIYNNAS VSKVAGDIAI
SPLPGGKYPF GTGLAPTFIG VNPYAKDPDL AVRFVAFLMS PEMYRLGAEK VGFVPATLSG
IRAASQVPSM SWLAPFVPLL QAGAALSDIQ RLTLVNRVTN FFTDMRPYFI NQVASYLRGE
QDAETTQMNI YKTWKSIMKI S
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