Gene Pars_1070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1070 
Symbol 
ID5055110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp954535 
End bp955962 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content57% 
IMG OID640468626 
Producthypothetical protein 
Protein accessionYP_001153300 
Protein GI145591298 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGCCC TGGCCTTAGT CATACTTCTG TCGGCTTTAG CGTTGTCCGC CACAATTTTG 
ACTAGGGCTG ACCAAGCCTC AATTGATGCA GCTCTGCCGG TACTCCAGAA GTATATCCCC
GACGTGAAGA TCATCCCGGC GGATCCTACC CAATGGCGGA CTTTAATAAG CAGGGGGGAG
GTTGACTTCT TGTGGGCCGG CGCGCCGGTG CTCTATGAAG CCCTTCTAAA AGAGGGCTAC
CTATCGCCTA TGCCCGACGT GCCGGAGCTT GGACAGGTGC CGGATAAGAT AGGCAATATC
CAACTGAAGA GGGTGGGGCC GGACGGGAAG ACGTATTATG TTGTATACGC GCTCCTGGGC
TACGTAATCG GCTACAGCCC TGAGTCACTC CGCAGAGCCG GGGTAGCCCC TGTCTGTACC
TGGCGCGACT TAGCCTCGCT CAACTTAACC AAGTACTACC TCCAGACGGG GAGCAAGCCT
CTGGCCATTG CTAAGCCAAC AAAATCTACT TCAACTGCAG CGATGATGCA ACTGGTGACG
GAGATCTACG GCTGGGAGGA GGGGTGGAAG TACTTGGCGG CGATGGCTGC GATGGCCAGG
TTTGTGGACT CCAGCGGCGC GGTTAGGGAC GCTGTGAAGA GAGGAGAGGC GCTATTTGGT
CCAATGGTCG ACTACTACGT CTTCCTAGCT GGACTAGGCT ACTGCATCCC CACGGACGGG
ACTGACGTCT TGTTCGACCC CATTGCCGTG CCCCGCGGCG CCAACACAAC CGTGGCCACT
ATTCTGACTA GGGTGTTCCT CACAGAAATG GAGAAGAGAC TTGTGGACAG GTACCTCCTC
CCCGGCAACC CGGCCGTGCT GGACTCCCCA GACGTGAACC AGACTAAGGC TGCGTTGCTC
AAGCAACATC TGCAAAAATT GATGAGCTCC AAGATCATGT ATGTGCCGCC GGAAAGGAGC
GCCTCGTATT ACTACTCCTT CATCTACTAC TACGAGGCTA CGTTGGTAGA TCTCCAAGAC
CTTCTCACAG ACGTCTGGAC TAAGGCGGCA AACGCCTACT TGACCGGTAA AATCTCCAAG
CAACAGTTCG AGGAGCTGTG GAAGAAGCTG GGGGCGCCAG TCAATTATAC AGACCCCGAC
ACCGGCAAGA CAGCTACCTT CACCTTCCAG ACAGCGGTTG AGATAAACAG CAAGGTGGGC
AGCGACCCTG TGTACAGAGA CAAGGTGTAC CAGGCGTGGC GCGAAGCGGC TAGGGCGAAG
TACGAGAAAG TAGCCCAGGA GCTACAGCGC TACGTTCAGG AAAACGCCGC CACGCCCCAA
CAGACCTCTA CGCCCCCACC CGCTTCCCAG GGCTACACCC CCATAATTGT GGCCGCCTTG
CTGTTGGCGG TAGTGGCAAT ATCGCTACTA CTGCTGAGGC GCAGATAA
 
Protein sequence
MRALALVILL SALALSATIL TRADQASIDA ALPVLQKYIP DVKIIPADPT QWRTLISRGE 
VDFLWAGAPV LYEALLKEGY LSPMPDVPEL GQVPDKIGNI QLKRVGPDGK TYYVVYALLG
YVIGYSPESL RRAGVAPVCT WRDLASLNLT KYYLQTGSKP LAIAKPTKST STAAMMQLVT
EIYGWEEGWK YLAAMAAMAR FVDSSGAVRD AVKRGEALFG PMVDYYVFLA GLGYCIPTDG
TDVLFDPIAV PRGANTTVAT ILTRVFLTEM EKRLVDRYLL PGNPAVLDSP DVNQTKAALL
KQHLQKLMSS KIMYVPPERS ASYYYSFIYY YEATLVDLQD LLTDVWTKAA NAYLTGKISK
QQFEELWKKL GAPVNYTDPD TGKTATFTFQ TAVEINSKVG SDPVYRDKVY QAWREAARAK
YEKVAQELQR YVQENAATPQ QTSTPPPASQ GYTPIIVAAL LLAVVAISLL LLRRR