Gene Pars_1017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1017 
Symbol 
ID5054428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp909021 
End bp909398 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content57% 
IMG OID640468575 
Producthypothetical protein 
Protein accessionYP_001153249 
Protein GI145591247 
COG category[R] General function prediction only 
COG ID[COG4113] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.504321 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.760781 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGCGT CGGCGCTGTA CGCCCTAGTG GCGCACTACG ATAAGTGGAT CAGGCATAGG 
GATAGGCTGG CTATCTTGCA CTTGACTATA TACGAGGCGG GCAACGCGTT GTGGAAAGAG
GCGAGGCTGG GGAGGGTTGA CTGGGCCGCC GCGGCTAGGC ATCTGAAAAA GGTGTTATCG
AGCCTCAAGG TGTTGGACGA CCCGCCGTTG AACGAGGTTT TGGGGGTGGC GGTTAAGAGG
GGGTTGACCT TCTACGACGC GAGCTACGCC TACGTGGCGG AGTCCTCCGG ACTGGTTCTA
GTGACTCAGG ATCAGGAGCT GTTGGCTAAG ACTAGAAACG CCATAGACGT CGTGACCTTC
TTAAAGAGGC TTGTGTAG
 
Protein sequence
MDASALYALV AHYDKWIRHR DRLAILHLTI YEAGNALWKE ARLGRVDWAA AARHLKKVLS 
SLKVLDDPPL NEVLGVAVKR GLTFYDASYA YVAESSGLVL VTQDQELLAK TRNAIDVVTF
LKRLV