Gene Pars_0796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0796 
Symbol 
ID5054686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp709135 
End bp710331 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content60% 
IMG OID640468357 
Product3-hydroxy-3-methylglutaryl coenzyme A reductase 
Protein accessionYP_001153034 
Protein GI145591032 
COG category[I] Lipid transport and metabolism 
COG ID[COG1257] Hydroxymethylglutaryl-CoA reductase 
TIGRFAM ID[TIGR00533] 3-hydroxy-3-methylglutaryl Coenzyme A reductase, hydroxymethylglutaryl-CoA reductase (NADP) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCTAA TGGAAGTGAA GCTCCACGAG CTGGACAAAC TATACGGCGA CGCCAACAAA 
GCCGCCGAGG CGAGGCGGCA GTACCTAGAA AAAGCCACCG GCGCCAAGCT GGAGAACATA
GGCAAGACTA TCATAGATCT CAACACCGTG GTGGGGCGCA ACATCGAAAA CGTAATAGGG
GCTGTGCAGA TACCAGTGGG CGTCGCCGGC CCCCTCTTGG TGAGGGGGGA CTACGCAAAC
GGCTACTTCT ACGTGCCCCT TGCGACGACG GAGGGGGCCC TCGTGGCTTC GGTAAACAGG
GGGGCTAAGC TCGTCACGGA GTCCGGCGGC GCGAGGGCCA AGGTGCTTAA AGACGGCATG
GCAAGGGCCC CCCTCTTCAA ACTACCCTCG CTGGTAGACG CCGTGGAGTT CGTGAACTGG
GTCATGCAAC ACTTCGAAGA GGTTAAAAAA GCCGCCGAGT CCACAACCCG CCACGGGAGG
CTGAAGGAGA TCCAGCCCTT CGTGGTGGGG AACTACGTCT GGCTCAGAAT GGTCTTCTCC
ACGGGAGACG CCATGGGTAT GAACATGGCG ACAATAGCAG CAGATGCCGC GGCGAGGTAC
ATACAGGAGG AGTTTCCCAA GGCCCGCCTC GTGGCCCTAA GCGGAAATAT GTGCGTCGAC
AAGAAGCCGA ACTCCGTGAA CTTCCTCCTA GGGAGGGGGA AGACCGTCGT GGCCGAGGCG
CTGATAAGGC GTGAACAGTT AGAAAAGCTC GGCACGACGC CGGAGGCGGT GCACGAGGTG
AACATCTCGA AGAACCTGGT AGGATCGGCG CTGGCCCACT CCTACGGCTT CAACGCCCAC
TTCGCCAATA TAATTACTGC TGTTTTCATA GCCACAGGCC AAGACGTGGC ACAAGTTGTT
GAGTCCAGCA TGGGCATAAC CACGACAGAG CCGAGGGAGG AGGGGCTCTA CATCTCCGTA
TTTCTACCCA GCCTCGAGGT GGGGACTGTG GGCGGCGGCA CCGGCCTCCC GACGCAGAGA
GAGGCGCTGG AGTTGTTGGG AGTGGCTGGG CCGGGCAACC CGCCGGGGAC AAACGCGCTT
AAATTCGCAG AGATAATAGC CGCCGCAGTG TTGGCGGGGG AGCTGAACCT TCTGGTGGCT
CTAGCCAGGA ATGAGCTGGC TTCTGCCCAC AAGAAGCTCG GGAGGGGGGC TAAGTAA
 
Protein sequence
MFLMEVKLHE LDKLYGDANK AAEARRQYLE KATGAKLENI GKTIIDLNTV VGRNIENVIG 
AVQIPVGVAG PLLVRGDYAN GYFYVPLATT EGALVASVNR GAKLVTESGG ARAKVLKDGM
ARAPLFKLPS LVDAVEFVNW VMQHFEEVKK AAESTTRHGR LKEIQPFVVG NYVWLRMVFS
TGDAMGMNMA TIAADAAARY IQEEFPKARL VALSGNMCVD KKPNSVNFLL GRGKTVVAEA
LIRREQLEKL GTTPEAVHEV NISKNLVGSA LAHSYGFNAH FANIITAVFI ATGQDVAQVV
ESSMGITTTE PREEGLYISV FLPSLEVGTV GGGTGLPTQR EALELLGVAG PGNPPGTNAL
KFAEIIAAAV LAGELNLLVA LARNELASAH KKLGRGAK