| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0780 |
|---|
| Symbol | |
|---|
| ID | 5054999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 697335 |
|---|
| End bp | 698696 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640468339 |
|---|
| Product | 2-methylcitrate dehydratase |
|---|
| Protein accession | YP_001153018 |
|---|
| Protein GI | 145591016 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGGG TAACTAAAAC CCTAGCCGAG TACGCCCAGT CCATAGACTT CTCTAGGGTG
CCCCCCGAGA CGCGGCACGA GGTCAAGCGG AGGATTATAG ACTCGCTTGC TGTGGCCTTC
GCCGCATACA CCGCGGAGCC TGTCGCCATA GCCAGGAGGG CCGCGTCCAA ATTCCCCACA
GCCAAAGGCG CCAGGATTGT CGGCACACGC TACCAAGTCA CGCCCGACTG GGCTACTTTC
GTCAACGGGC TCATGATTCG CTACCACGAC TTCAACGACA CATATCTCAG CAAGGAGCCC
CTACACCCCA GCGACTTGAT AGGCGCCGCC CTCGCCGTTG GGGACTACGT CGGGGCCAGG
GGCACTGACT TAATTACGGC CATCGCAATC GGCTACGAGG CCTCTGTCAC TTTCTGCGAC
GGGGGGACTC TGCGGAAGAG GGGGTGGGAC CACGTCAACT TCTTGGGCAT AGGCAGCGCG
CTGGCGGCGG CCAAGCTCCT TGGCCTAGAT ACAACAAAGA CGCAACACGC CCTAGCCATC
TACGCAGTGC CCCACGCCGC GATGCGCCAG ACGAGGGTAG GCGAGCTCTC CATGTGGAAA
GGCGCGGCCG CCGCCAACTC CAGCAGAAAC GCGGTCTTCG CCGCCCTGCT GGCGCAGGAG
GGCTTTACGG GGCCCTATAA GCCCTTCGAG GGGGAGATGG CCTTCTTCAA GCAACTACTC
CAGGGGGACT TCGACTTCTC AGTCCTCAAG CCGCTGGAGG AGGGCAGGCC GCCCCGGAGG
ATACTCGACA CATACATAAA GCCCTACCCC GTCGAGTACC ACGCCCAGAC CGCCGTCGAG
GCCGCGCTGA GGCTTAGGGA GAGGGTTAGG CTCGAGGAGA TAGAAAAGAT CAGAATCGAC
ACATACGAGG CGGCGTACAC CATCATAGGC CCTAAGGACC CAGAGAAGTG GGACCCACAC
ACAAGGGAGA CCGCCGACCA CTCGTTGATG TGGATAACGG CGGCGGCCCT CGTCTGGGGC
CCCATAAAAA TTGAACACTA CAAGGACCTT CGCAACCCAG CTGTCCTCTC TCTGATGAAG
AAGATGGAGG TGAACCTAGA CCCGGAGCTG GACAAGCTGT ACCCACAGGC CTTCCCCACC
GTGATAACCG TCTACACGAG GGGAGGCGCC AAGTACACCG AGCGCGTCGA CTACGCAAAG
GGGCATCCGA AAAACCCCAT GACAGACGCC GAGCTGGAGG AGAAGTTCAA CACACTGACC
CGCGACGTGT TGCCAGAAGA CGCCAGGAAG AGGATCTTGC AAATGCTCTG GCGCCTTGAA
AACTACGACA TAAGCGACTT AGTAGAAGCC CTCGCAGTCT AA
|
|---|
| Protein sequence | MDRVTKTLAE YAQSIDFSRV PPETRHEVKR RIIDSLAVAF AAYTAEPVAI ARRAASKFPT
AKGARIVGTR YQVTPDWATF VNGLMIRYHD FNDTYLSKEP LHPSDLIGAA LAVGDYVGAR
GTDLITAIAI GYEASVTFCD GGTLRKRGWD HVNFLGIGSA LAAAKLLGLD TTKTQHALAI
YAVPHAAMRQ TRVGELSMWK GAAAANSSRN AVFAALLAQE GFTGPYKPFE GEMAFFKQLL
QGDFDFSVLK PLEEGRPPRR ILDTYIKPYP VEYHAQTAVE AALRLRERVR LEEIEKIRID
TYEAAYTIIG PKDPEKWDPH TRETADHSLM WITAAALVWG PIKIEHYKDL RNPAVLSLMK
KMEVNLDPEL DKLYPQAFPT VITVYTRGGA KYTERVDYAK GHPKNPMTDA ELEEKFNTLT
RDVLPEDARK RILQMLWRLE NYDISDLVEA LAV
|
|---|
| |