| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0590 |
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| Symbol | ubiA |
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| ID | 5056426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | - |
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| Start bp | 525224 |
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| End bp | 526102 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640468149 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001152834 |
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| Protein GI | 145590832 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.358239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGTTCTAA GAAATATAAA TCGAAAACAT TTTTCGTCTG TGAACCCATA TTTAATCCTA
CTTAAGCCCA GGGTCATCTG GCTTTTGATC CTAGCCAGCC TAGCGGGGTA CCTCTACTCG
GCGCGGCAAC CCAACATCGC CCAGGCATTC TCGCTTTTGC TTGTGGCGTT CCTCTCCACG
GGCGGCGCCG CTGCATTTAA CCACTACTGG GAGCGCGACA TAGACGCGGC GATGAGGAGG
ACGGCGAAGA GGCCGCTTCC TGCCGGCTTG GTTGAGCCCC GCAACGCGCT GGCGTATTCC
CTAGTCCTCT CCGCTCTGGG CATTGCGCTG GGATTCCTCT TACTGGGCCC CCTACCGGGC
CTCTTCGTAT TTCTGGGGTG GTTCTTCTAC GCTGTGGTGT ACACAGTCAT TTTAAAGAAG
AGGACGTGGC TCAACATACT CGGCGGCGGC TTTGCTGGCA ACGCCACCTT CCTCGGCGGC
TACGCCCTAG GCGCAGGTAC GGTGGACTTA CACGCTGTGC TGATCTCCTT CGCCATCTAC
CTCTGGATCC CATCGCATAT ATGGGCGCTG GCTTATAAAT ACAGAGACGA CTACAGAAGA
GCCGGCGTCC CCATGTTGCC CACAGTTGTG GGGGAAAAAG CCGCGGTGGC TATAATCTCC
CTATTGAACT TAGCAAGCGC CGCCTACATA ATGACCCTGT ACCTCGCCTT TGGCGGCGGG
CTTCTAGGTG GGGCCCTCGT CGCCGCCGGC GTCGTGGCGA CAATCGCCAC TGGTGCATAT
GCCCTGGCCA CGAAGACAGA CGAGGCCATG TGGAAGATGT ACAAGGCCTC AAGCCCGGTG
CTCACCCTTT TCCTCCTGGC TTTGATAGCC AATGCGTAA
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| Protein sequence | MVLRNINRKH FSSVNPYLIL LKPRVIWLLI LASLAGYLYS ARQPNIAQAF SLLLVAFLST
GGAAAFNHYW ERDIDAAMRR TAKRPLPAGL VEPRNALAYS LVLSALGIAL GFLLLGPLPG
LFVFLGWFFY AVVYTVILKK RTWLNILGGG FAGNATFLGG YALGAGTVDL HAVLISFAIY
LWIPSHIWAL AYKYRDDYRR AGVPMLPTVV GEKAAVAIIS LLNLASAAYI MTLYLAFGGG
LLGGALVAAG VVATIATGAY ALATKTDEAM WKMYKASSPV LTLFLLALIA NA
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