Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_0037 |
Symbol | |
ID | 5054322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | - |
Start bp | 30774 |
End bp | 31259 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640467617 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001152306 |
Protein GI | 145590304 |
COG category | [K] Transcription |
COG ID | [COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 |
TIGRFAM ID | [TIGR00270] conserved hypothetical protein TIGR00270 |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTATTGTG AGATATGCGG TCGTGTGATA GAGGGGGATC CGATACCTAT AGAGGTGGAT AAGGCGGTTT TGTATGTATG TAGGGGTTGC GCCGCGAGGT ATGGTAAGAG GGCTCCGCCC CAGACCGTCC AGAAGAAGCC GCCGCAGTCA CAGAAGGCGA AGCCGCCTTC GCCGAGGCTA CCCCCTGTTG AGGTGGAGTT AGTGGAGAAC TACGGCGAGG TGATAAGAGT CGCGCGGCAG AATCTCGGCT TGTCCAGAGA GGCCTTGGCT GCTATGTTGG GGGTGAAGGA GACTGTGTTA AGGAGGGTCG AGGCTGGGCA GTTGCAGCCG GACTACGCGC TTGCGAAAAA GCTGGAGAAG GCGCTTGGGG TCAAGCTACT GGTTGAGGCA AAGGAGGAGG CTAGCGGCGC CAAGAGCGGT GGGAAAGTGG AGAGGGGGCT GACGCTAGGC GAGGTGGTGG AGATCAGAGA AGACGGTGAG AAATAA
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Protein sequence | MYCEICGRVI EGDPIPIEVD KAVLYVCRGC AARYGKRAPP QTVQKKPPQS QKAKPPSPRL PPVEVELVEN YGEVIRVARQ NLGLSREALA AMLGVKETVL RRVEAGQLQP DYALAKKLEK ALGVKLLVEA KEEASGAKSG GKVERGLTLG EVVEIREDGE K
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