| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_2302 |
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| Symbol | |
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| ID | 6459459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 2478075 |
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| End bp | 2481503 |
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| Gene Length | 3429 bp |
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| Protein Length | 1142 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642726275 |
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| Product | WD-40 repeat protein |
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| Protein accession | YP_002016947 |
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| Protein GI | 194335087 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.616134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAGCA TTCCCCCAAA CTCTGAAACA GCAAAAAAAG ATTCCTTAGG CTCAACAGGA
AAGAATAATC GTCACGATAA ACAGCAAAAA AGTTTTGCCG TACGTCTGGT GGGGTATGAC
ATGTTTCTTT CTTTTTCACT GGGGCCCCCT CCACGCGGAA CACGAAACTA CGCATCCGAT
CTCGCCCGCC GTCTGCAGGA TAGAAATTTC ACCGTGTTCT TCAGCGAAGA GGAGGCTGTT
CCAGGAGATC AACTCGACAG TACTCTCCAA CAAGCTCTTT TTCGTTCGAA ATGTCTTGTG
GTCATAGTCA ATCGCGGGAC GCTGAAGGAT CCCCGCTGGG TTCGCAAGGA GGTTGAGGAA
TATAGAGCCC GGCATCCCGG TCGTCCAGTC ATTATCATCA ATATAGGTGG TGCGTTACAA
GACCCTGAAC TGAAGGATGA GGCGCAGCAA TGGCTTGTCT ACGAGGATAA AATCTGGCTT
GATGAATCGG TATCGGCTGT AGAGCAGGGA AGGGTAAGCG AAAGGCTTTT AGATCGACTT
TCTATTACGC CAAAACATAT CAAGAGGAAT TTATGGTGGA GGGGAATTAA AGCTGGAGTT
TTTTCTCTTC TCACTGTTTT TATTGTCGGG ATGCTTTTTT TTGCCTGGCG TTACGGAAAC
GAAAATCAAC GAGCTAAAGC AGCAACATTG CTTTCTGTGG TTAACAAGGA GCAAACCCTG
GATATTAAAT TGGCTACACG CCTTGCTCTT GAAGTAGAAA AAAGTGTGCC GTCGCCCCAA
AGTTACGAAA TACTCAAAGA GTGTTATGAC CAGCTTCCCG ATTATGTCGC CAATCTTGAT
GCTTCAAACC GTCCATTGAC AGGTATATTC AGCAATGATG GAAACATTTT TGCTGCTGGA
TTTCATGATG GAACCGTGAA TGTATGGCAA CCACCGTCCT GGAAACATAT TTTTTCAAAG
AAACATGACG CTGCCGTTTC AGTAATAGCA TCCAATGAGG CTGGAACACT ACTTGCATCT
TCTGATGCAC AGGGTTTGAC CTGTGTTTGG AATGTGAAAG AGCGGAAACC GCTCTGGAGT
TTTCAAAGCG CAAAGCCATT GTCTGCTCTG GATTTTACGC CAGATAGCAA TCGTTTGCTG
CTCATCGAAG GAAAAAAGTA TCAGAGCCAG GTTTTCTTTT CAGGCCGGGT TTTTGATATA
GCTACTGGCA GGCAACTCAT GGAGTTCAAC AATGCGCAAC CCTTTACGGG AGGATTTTTC
ATCAATGACG GGAATTTGGT CGTTACAGGT TCGAGTGATG GTTCCGTGCT GGTATGGGAT
TCATACTCTG GTGCGTTGCG AAAAACGTTG CTGCCTAAAA GCGGGGAGGG AATTGATGCT
ATTGAAGCAA TTGTGTCAGA TGCCAAACGT GATCTCTTTG CTGCGGTAAC ATTTACAAAC
GTCCATCTCT GGAGAAGCCG TGACTTATCT TCCTTTTTTC ACACATCTTT AAGCAGTGGT
AATGTCAGTG TTGTTCTGCA GGAGCATCCT GAGCGCAGTG TGCTTGCTGT CGGTTGTGCC
AACGGCATGG TGCGGTTGTT CAGCTGGTGC CCGGCTCGTC CCGAACAGCC GGTTACTGAG
ACGTGTGTAA AGTTGCCGTT CAATACGATC AAGGTTGCCC TCAACCATGA AAAGGATTAT
TTCGCTGCTG GCAGCGGTCA TGGTATTGTG AATCTCTGGC AGCATGTTGG TCTGCCACAA
GTCTGTGGAA GGGTCACGAC CGGAAGCACA ACGAATACGA CAGTCCTCTC TTTTGATCCG
ACCGGCGAAT ATCTGGTGGT AGGCACTGAG TATGGTTCAC TGCAGGTTGT GAAAGGATGG
CGGTCGTTGC GTTACCAGAC TATTGCTCAT CAAGGTGAGG AAAATATAAC GGCATTTGCC
TTTCACCCGA AGAAAAAATG GGTTATAACA GTAGCGGAAA CTACAGATAT TATCGATAAA
ACAAAACCAT CACATGCAAC GGTTGTCCTT TGGGATTATT CCCGAAACCC CGCTGTAGCC
ATCGACACTG TTGTTCATAA TAGTATTGTA AAAGATATCG CAGTCAATCG AGATGGAACG
TTTTATGCGA CAGCAAGCGG CAATAAGATT TCATTATGGT CAACCCAGGA TGGCTGTAAT
CTGAAAACTA TCACTTTCCC TGCTGAGGTT CGTTGTCTAT CATTTGCTAG GCAGCATGAT
CTGCTCGCCA TAGGTTTGGG AGACAATATG GTTATGGTAT ACGAGAGAGG AAGCTGGAAG
CAGCTAAAGC AAATGAAACT TTCAAAGTCT GTGTCAAAAG TAGCATTCAG CGCCGGGGAT
CGTTACTTGG GCGCGCTTTG TTCCGGAGGG CCTGTTTACC TTTATGAGAC AGGAAACTGG
AATGCTTCCC CCAGAATGGT TAGTGGTTTT GACGGGCGGG ATCGTCTACT TACTATGGCT
TTCCACCCGG TCGAGGATCT TCTGGCAATC GGCACTGAAA AGGACGCGTA TCTCTGCGAC
ATTGTAACTG GCAAAAAGAA AGGCGTGTTT TTTGCCGGCG AATGGATTTT TAACATGGCC
AGATCAAATG ACGGCAAGAT GCTCTTGACC GAAAACGGTG ACGAACGAGC TGGCATTCCT
GTATCGGTTC CAACCGTCTT TGATCTTTTT TCCCAAGAAT TACTCTTTAC CATTCCGGGC
ATTCCCCTGC ACAGTGAACC CCAATTTTCA TATGATGATC AACTCATTGG AGCTTTGGAC
TTCAACGACC TTATCCTTTT CAGCTTGTCA CGGGATACAC TTATCCAAAG GGCTGAAAAT
GCTGTTATGT CAAGGCCTAT GACAGCGGAT GAAAAGAGGA GATATCTTGG TGAGGCTGGG
TTAAATTCAT CGTTTCCTGT TCATGCATTT TTTTTCATAC CTCCGGAGCA ACGACTCGAA
ACATTAGGCT ACCTTTCGCT TTTTTTTCTT TGTGCAGTCA TACTGGTAGC GCTTGCAGGC
CGGCCATTGA CGTTCCGTGA TACACTTGGT ATAGAAATGC CTTTTTCATC TGAGAGAGCA
CAGATGATCA TTGAAAGCTG GAACAAGGAT TTACGAGCCC AAGCTGCCGA TCGGCAGACA
AAGGCCGACT TTATTATGTT ACTTGTCTAT CCCGTAGTCC TCAGTCTTGC CTGCGTGATT
TTGTCGGAAA CCTCGTATGG CTGGATGCAA ACTGCTGGTA TCATTTTTTC CTGGTTAGTG
CTTCTGTGTA TACCTCTGGA TGCTCTTGAA AACGTGATGA TCCTGAAAAT GCTTGACGGG
GCAACGGATA AACCAATACC ACAGATCACT ACGGCTGCGG CAATAATAAA ATTTATGCTG
GTTATTATGG CGTTACTCTA TATCTTAATC AAAGTGTTTC CTTATATCCA GTCACAGCAG
ATCGGTTGA
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| Protein sequence | MDSIPPNSET AKKDSLGSTG KNNRHDKQQK SFAVRLVGYD MFLSFSLGPP PRGTRNYASD
LARRLQDRNF TVFFSEEEAV PGDQLDSTLQ QALFRSKCLV VIVNRGTLKD PRWVRKEVEE
YRARHPGRPV IIINIGGALQ DPELKDEAQQ WLVYEDKIWL DESVSAVEQG RVSERLLDRL
SITPKHIKRN LWWRGIKAGV FSLLTVFIVG MLFFAWRYGN ENQRAKAATL LSVVNKEQTL
DIKLATRLAL EVEKSVPSPQ SYEILKECYD QLPDYVANLD ASNRPLTGIF SNDGNIFAAG
FHDGTVNVWQ PPSWKHIFSK KHDAAVSVIA SNEAGTLLAS SDAQGLTCVW NVKERKPLWS
FQSAKPLSAL DFTPDSNRLL LIEGKKYQSQ VFFSGRVFDI ATGRQLMEFN NAQPFTGGFF
INDGNLVVTG SSDGSVLVWD SYSGALRKTL LPKSGEGIDA IEAIVSDAKR DLFAAVTFTN
VHLWRSRDLS SFFHTSLSSG NVSVVLQEHP ERSVLAVGCA NGMVRLFSWC PARPEQPVTE
TCVKLPFNTI KVALNHEKDY FAAGSGHGIV NLWQHVGLPQ VCGRVTTGST TNTTVLSFDP
TGEYLVVGTE YGSLQVVKGW RSLRYQTIAH QGEENITAFA FHPKKKWVIT VAETTDIIDK
TKPSHATVVL WDYSRNPAVA IDTVVHNSIV KDIAVNRDGT FYATASGNKI SLWSTQDGCN
LKTITFPAEV RCLSFARQHD LLAIGLGDNM VMVYERGSWK QLKQMKLSKS VSKVAFSAGD
RYLGALCSGG PVYLYETGNW NASPRMVSGF DGRDRLLTMA FHPVEDLLAI GTEKDAYLCD
IVTGKKKGVF FAGEWIFNMA RSNDGKMLLT ENGDERAGIP VSVPTVFDLF SQELLFTIPG
IPLHSEPQFS YDDQLIGALD FNDLILFSLS RDTLIQRAEN AVMSRPMTAD EKRRYLGEAG
LNSSFPVHAF FFIPPEQRLE TLGYLSLFFL CAVILVALAG RPLTFRDTLG IEMPFSSERA
QMIIESWNKD LRAQAADRQT KADFIMLLVY PVVLSLACVI LSETSYGWMQ TAGIIFSWLV
LLCIPLDALE NVMILKMLDG ATDKPIPQIT TAAAIIKFML VIMALLYILI KVFPYIQSQQ
IG
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