| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_2282 |
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| Symbol | |
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| ID | 6459514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 2461165 |
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| End bp | 2462466 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642726258 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002016930 |
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| Protein GI | 194335070 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.883499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCAT CATCGGATTC TACAAGTCTT GCTGAAGGAC GGCGATGCTT TGAAGAGGGG
GATTACTCTC AAGCCAAGCA TACTCTTGCC AACTGTCTTC GGACAGGTGT CGATCGTACA
GAGGCCTGTG TCCTGCTTGG CAGGATCTAT CACAACGAAG GCAACTATAC GAACGCCGTG
AAATGTTTCG AGCGAGCAAT ATCTGACGGG CAGGAATCTG CCGATGTCCG CCACCTGCTG
TGCGCCAGTC TGTTTGAAGC GAAACGCTAT GATGAGGCAC GATTGCACTT GGAAGCGGTC
ATCGAAATGT ATCCCCGGTA TTGGCAGTCC AGGCTGCTTC TCGGGAAGCT TTTCATTGAA
ACGGGCGATC TGAACGGGGC GGAATCAATA CTGCGACATG CGGTGCACAT CCATGAGCAG
GAGCCGGAAC TTTGGTATCA CCTCGGACTT GCTCTTTGTC GTCTGGGGCG GTACGATGAA
GCCGGCCCGG TATTGGAGCG TGCTGTAGAG CTTAAACCCG ATACCGTTCC TCAGTATCAT
TACCTTTTAG GGAAAACACA GCTTGAGCAG GGCTTTGCTG AAAAGGCAAT CAGCTCATTC
AAGCGATCAG CCAGGATCTA CCCGCTTGCG GAACTGTACT TCCCCTTAGG GCGGGCCTGC
CAGCTTGCGC AGCGCTATGA CACGGCCTAC CGTGTGTATG AAAAAGCGCT GGAAAGGCCA
ATCAATACAA GCATCCGTCA TATCATCCTT TTCCATCAGG CCGAAATTCT TTTCGAACAG
GGTGAAGAGG AAGACCGCTT GAAACGAGAG CATAACCGGT ACCGCCAGGC CGAACAGAAA
TTGTCTCAGG CACTTGAGCT CAATCCCGGT TTTGTCGAGG CGCTTCATTT TATGCCGATG
GTGCATATCA GAATGAATTT GCCGGAAATT TCAGCACAGG AGCTTCTGGA TCTGCTCGGC
CTTGATGAAA GCGATCTTCA CAGTTGTCGA GATGCAAACG GCATTCCGGA AATTCTTTCA
CACCGATATC TTCAGCGCGT TCATCTCGGA TATGCGTTTT CGAGGGCGGG GCGTTATCCG
GAAGCGCGGA AAGCTTTGGA AGCAGCGCTC AATGATCCGG AAGTTGACAA TGAGCCGGTT
GTACAATGCA GAATCCTGCG GCGTCTGGCT CTCGTTCAGT TGGAAATGGG CGATAGACCC
GGTTCCTGCA GCACATGGCG TCGATTGGCG GCTATTGATC CGGAAGATCA CTACGGTGCG
GCGAGCGCCC TTGCAGAACT TGAACTGGAG GATGATGAAT GA
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| Protein sequence | MTSSSDSTSL AEGRRCFEEG DYSQAKHTLA NCLRTGVDRT EACVLLGRIY HNEGNYTNAV
KCFERAISDG QESADVRHLL CASLFEAKRY DEARLHLEAV IEMYPRYWQS RLLLGKLFIE
TGDLNGAESI LRHAVHIHEQ EPELWYHLGL ALCRLGRYDE AGPVLERAVE LKPDTVPQYH
YLLGKTQLEQ GFAEKAISSF KRSARIYPLA ELYFPLGRAC QLAQRYDTAY RVYEKALERP
INTSIRHIIL FHQAEILFEQ GEEEDRLKRE HNRYRQAEQK LSQALELNPG FVEALHFMPM
VHIRMNLPEI SAQELLDLLG LDESDLHSCR DANGIPEILS HRYLQRVHLG YAFSRAGRYP
EARKALEAAL NDPEVDNEPV VQCRILRRLA LVQLEMGDRP GSCSTWRRLA AIDPEDHYGA
ASALAELELE DDE
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