| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_2064 |
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| Symbol | rplC |
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| ID | 6458925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 2248018 |
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| End bp | 2248647 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642726048 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_002016721 |
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| Protein GI | 194334861 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000717701 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.401636 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGCTA TTCTTGGAAA AAAAATTGGT ATGACTCGCA TATATAACGA GAAGCGCGAG
GCTGTACCCT GTACGGTTAT CCAGGCCGCT CCCTGTTTTG TGTCACAGGT GAAGACTTCG
GATAATGACG GCTATGAGGC TTACCAGTTG AGTATTGGTG AGAGAAAAGA AGCAAAAGTA
TCCAAGCCCA TGAGGGGGCA TTATGCTAAA GCCGGAATCA CTCCCGGCTA CAAGATTGCT
GAATTCGGTA AAGATCTTAT GGATGCAGAT CTCGAACTTG GCAGTTCTGT GAGCGTAGAT
ATGTTTAAAG AGGGTGATAA GGTTGATGTG CGTGGTGTAA CGAAAGGTAA AGGTTTTGCT
GGTGTTGTCA AGCGTCACAA TTTTGCCGGT GGTTCCAGAA CACATGGTCA GTCCGACAGG
CTGAGGGCTC CTGGTTCGGT AGGCGGTTCA TCCGACCCGT CACGTACGTT CAAAGGAATG
AGGATGGCCG GCCGTATGGG CAGCAAGAAT GTTAAGGTCA GGGGGCTTCA GATTGTCAAG
ATTATCCCTG AGTCAAATCT TCTTGTTATC AAAGGTTCGG TGCCCGGTGT GAAGAATTCA
TATGTGGAGA TTGTTACAAG AAACAAGTAA
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| Protein sequence | MAAILGKKIG MTRIYNEKRE AVPCTVIQAA PCFVSQVKTS DNDGYEAYQL SIGERKEAKV
SKPMRGHYAK AGITPGYKIA EFGKDLMDAD LELGSSVSVD MFKEGDKVDV RGVTKGKGFA
GVVKRHNFAG GSRTHGQSDR LRAPGSVGGS SDPSRTFKGM RMAGRMGSKN VKVRGLQIVK
IIPESNLLVI KGSVPGVKNS YVEIVTRNK
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