Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1932 |
Symbol | |
ID | 6460027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 2114651 |
End bp | 2115334 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642725917 |
Product | surface antigen msp4 family protein |
Protein accession | YP_002016591 |
Protein GI | 194334731 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3637] Opacity protein and related surface antigens |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.687868 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAG TATGTTCACT TCTCGCTGTT GCAGTCCTCC TGATGGGCGG ATCTGCATCA TCCTTTGCAG GGACCCCTTA CGCATCAGGC AATATCGGTG TTACATGGCT TAGCGATTCA CAAGCAACAC TCGGAGATTA CTCAGAAAGA GACGAATACC AACTCGAAGT TGATTTTGAT TCGGGTATCG CCCTTACCGG TGCTCTGGGT TATGATTTCG GATCTACACG ACTTGAAGCA GAACTGGGTT ATCAGAGCAA TGATGCTGCA GAGATCCGTT GGTATGAGGA TGGTTTCGAT GACTCGTATG ATGCTTATGA GTTAAGCGGT GATGTTTCAC TGACAACATT GATGCTCAAC GGCTATTATG ATATCAAACC TTCTGATGCC TCAGACCTTG AAATTTTCCT GACTGCAGGA ATTGGCGCTG CATTTTATAC TCTGGACTTT GGAGAGGTTG ATGATGATGA ATATCGCGGA ACATATCATG GCAGCACCCT GGCATACCAG ATCGGGGCGG GTCTTGCCTA CGCAGTCAGT TCTGAACTGA CAGTTGAAGC ACGCTATCGT TATTTCAGCA CCGCTGAGTT CAGCACTGAT GATGACTTTG ATACATTTGA TGACGGCTAC AACCTGGATT TAAGCAGCAA TGCAATGCTT ATAGGTCTGC GCTATAACCT CTGA
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Protein sequence | MKKVCSLLAV AVLLMGGSAS SFAGTPYASG NIGVTWLSDS QATLGDYSER DEYQLEVDFD SGIALTGALG YDFGSTRLEA ELGYQSNDAA EIRWYEDGFD DSYDAYELSG DVSLTTLMLN GYYDIKPSDA SDLEIFLTAG IGAAFYTLDF GEVDDDEYRG TYHGSTLAYQ IGAGLAYAVS SELTVEARYR YFSTAEFSTD DDFDTFDDGY NLDLSSNAML IGLRYNL
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