Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1713 |
Symbol | |
ID | 6460201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 1871956 |
End bp | 1872654 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642725702 |
Product | Conjugal transfer protein |
Protein accession | YP_002016378 |
Protein GI | 194334518 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3701] Type IV secretory pathway, TrbF components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000549304 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAAG AAGCTTCGGG CCGGAAGTGG TCTCCTGAGG GCGGGCTTGA TACGCCTTAT AAGCGAGCCA GACAAGAGTG GGATAACCGG ATGGGCAGTG CGGTTATCCA GGCTAAAAAC TGGCGACTTG CAACCTTTGC GACGTTGCTG TTGGTAGCGT TTCCCTCTCT TCTGGGGTTG GTGTATCTGG GGGCTCAACC GAAAGCTGTT CCTCATATTG TTGAGGTTTC TGCTGATGGC AAGGCTGTTT ATCGGGGGCC GATTGGCAGG AATTGGTCGG AGTACCGGCC GGATGAGGCG TCGGTGAAAT ATCATCTGGG GCGGTTTGTT CATGATACTC GTATGGTCTC GTCTGATAAG GCTGTTGTGA AGCGAAACTG GCTTGATGCG TATACGCTGG TGACGCAACG TGCGGCTAAT ACGCTTAATG AGCATGCAAA AAAACATAAT CCTTTTGACC GTTCCGAGAC GCAACGTGTC AGCGTGCAGA TTCTCGGGAT GGTCCAGATT TCAGCCGAGA GCTGGCAGAT TGACTGGAAG GAGTCTTCAT GGGGTAAGCG TGGGGAGCCT TTTGGTGATG AATTCTGGAG AGGGATCTTC AGCATTGCGC TGAAAAAACC CGAGAGCGAA CAGCAACTGG CTGCTAATCC GATAGGGTTG TTTATCGATG AGTTTCACTG GTCAAAAATT CAACGTTAA
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Protein sequence | MSKEASGRKW SPEGGLDTPY KRARQEWDNR MGSAVIQAKN WRLATFATLL LVAFPSLLGL VYLGAQPKAV PHIVEVSADG KAVYRGPIGR NWSEYRPDEA SVKYHLGRFV HDTRMVSSDK AVVKRNWLDA YTLVTQRAAN TLNEHAKKHN PFDRSETQRV SVQILGMVQI SAESWQIDWK ESSWGKRGEP FGDEFWRGIF SIALKKPESE QQLAANPIGL FIDEFHWSKI QR
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