| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1571 |
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| Symbol | |
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| ID | 6460438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 1710678 |
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| End bp | 1711238 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642725559 |
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| Product | peptide deformylase |
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| Protein accession | YP_002016236 |
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| Protein GI | 194334376 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00704863 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATATTAC CTATAACAAT ATACAGTGAC GAAGTTCTTC GACGTAAGGC AAAGCCTCTC
AAGGGCATTG ACACATCTCA CGAGGAATTG ATCGGCAATA TGATAGAGTC TATGCGCAAT
GCATCAGGCA TTGGTCTTGC AGCGCCTCAA ATAGGCCTTT CCATGAGGCT TCTCATCGTC
GATCTCTCTC CGGTACAGGG GTATGAAAAT GCAGAGCCGA TGGTGGTGAT CAATCCTCAT
ATTCTGGCTG TAAAGGGCTA TAATGCTATG GAAGAGGGGT GCTTGAGTAT TCCTGATATT
CATGCCGATG TCGTCAGGCC TTCGTCGATT CAGCTTAAGT ACCGTAATGA GCATTTCGAG
GAGAGAGTAG ATGAGTTTTC CGCTTTGATG GCCAGGGTGC TTCAGCATGA AATCGATCAT
CTCGATGGCA CTCTTTTCGT TGATAAGCTG CAGCGCCGTG ACCGGCGCAA AGTCCAGAAA
TCACTGGAGG ATATTGCGGC AGGAAAGGTG CATACCACCT ATCCCGTGGC GGAAATCAAT
CAGGGTGCCA AGGCTTCCTG A
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| Protein sequence | MILPITIYSD EVLRRKAKPL KGIDTSHEEL IGNMIESMRN ASGIGLAAPQ IGLSMRLLIV
DLSPVQGYEN AEPMVVINPH ILAVKGYNAM EEGCLSIPDI HADVVRPSSI QLKYRNEHFE
ERVDEFSALM ARVLQHEIDH LDGTLFVDKL QRRDRRKVQK SLEDIAAGKV HTTYPVAEIN
QGAKAS
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