Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1355 |
Symbol | truA |
ID | 6458719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 1475749 |
End bp | 1476462 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642725339 |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_002016024 |
Protein GI | 194334164 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0794079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0223344 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTATCG AATACGACGG GACAGACTTT GCGGGGTGGC AGCGGCAGGA TGGTGCTGTT TCGACCGTAC AGGGTGAAAT CGAAGCTGTT CTTCGGAGGA TACTTCAGGA GGCGGTTTCT ATCACAGGGG CCGGACGAAC CGACAAGGGC GTTCATGCGA TGGGTCAGGC GGCATCGTTC ATGACCGGCA GCTCAATGGA AGCGGGCCGA CTGTGCCATT CGTTGAATTC GCTCTTGCCT TCATCGATCA GGATCATGTC CCTCATTGAT GTTGATGGTG ATTTTCATGC GCGTTACAGC GCTCTTTCGA GACAGTACCG TTATATGCTC AGGCAGCGCG AGTCTGCAAT TTTTCGCCGA TTCAGCGGTT ATGATCGAGC TTCTCATGAT CTCGATCAGC TCAACAGCAG GGCATCGGTG TTGCTGGGAC GTCATGATTT CAAGGCTTTT TCAAAAAGCG GTTCCGATAC CCGGACGACA TGCTGCACGG TCTCGGAAGC GCAATGGTTT CGTGAGAAAG AGTTCCTTGT CTTTCAGATA TCGGCAAATC GTTTTCTTCG CTCTATGGTG CGTTATCTGG TGAGCGCCAC ACTCCGGTTT TCCGGTGAAG AGATCAGTTA TGCTCTTGTA AGCCGTCAGC CGATCAAGGG GCTGCTTCCA GCTGATCCGG CTGGACTTTT TTTGTGGGAG ATCGGCTATG CGTCTGCCGG GTAA
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Protein sequence | MIIEYDGTDF AGWQRQDGAV STVQGEIEAV LRRILQEAVS ITGAGRTDKG VHAMGQAASF MTGSSMEAGR LCHSLNSLLP SSIRIMSLID VDGDFHARYS ALSRQYRYML RQRESAIFRR FSGYDRASHD LDQLNSRASV LLGRHDFKAF SKSGSDTRTT CCTVSEAQWF REKEFLVFQI SANRFLRSMV RYLVSATLRF SGEEISYALV SRQPIKGLLP ADPAGLFLWE IGYASAG
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