Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1331 |
Symbol | |
ID | 6458580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 1449865 |
End bp | 1451907 |
Gene Length | 2043 bp |
Protein Length | 680 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642725318 |
Product | phosphofructokinase |
Protein accession | YP_002016003 |
Protein GI | 194334143 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0205] 6-phosphofructokinase |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000164753 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCCTGAAA ACGCCTTGAA ACCACCCACC ATCTTTCTGT CGTACCCTTC TAAAGAAGAA TCCTTTGTCG CAAGAATCTG CTACTATCTC GAGCGGCAGG CACGAGTAAA ATGTTACTTC AATCCTGAAC AAAAAATAGC TGGAGATTTT GAACAACGAA TTCAACAAGC AGCACAAGAG TCAGACTATT TCGTTTTGTT TCTCTCGGGG AACACAACGT CAAGCAAATG GCAAAAAACT GAATTGCAAC ACTGGCGGAA GGCCCATCCC GATATGCTCA CACGCATCAT CGTTGTCAAC CTGCACACAA TGATGCTCGA TGATAAGCCT AATGAACTCC CCCCAAACCT GGAACGAATC ATCATTTCTG AGCCCGAAAA GCAGGGAGTG TACTGTTCAG AACAAATTCT CAAACTTTTT GCTCTGCCCG CAGCCCCATT CGATGGACTT CCGGTAACCA TTCAGGTCCT TTACGAAAAA GAGATCATCA ACGCCTACAT GCGCAACAAT GGGCAACTGC CTGATACACT CATCAGCAAA GGGTATCCTC CAACCTGGCC AAAAGTCAGA AAAATCCAGT CGTCAACGAC CAGCAATCCC CTGAACGAAA AAAAATTCGG GACCTATCGA GCACCGGATT CCAGCATCAG CGTTGACGCA CGTCATCAGA CAGGCAACAA TGCTCACTGT ACCGACACAT GCCAACTCGA CCTAACATTC CCTGAAGCCG GACCACGGCA AACTATCATC ATCCCCTCAA ATCCGTTTAA CGTTGCAATC TTGGTTTCAG GAGGTATCGC GCCGGGCATC AATTCTATCA TCTCGGCCAT TGCAGAACGC CATGAAACCT ATCAGAACGA ATACCGTAAC ACCTACCATA TCCAGCATCA TACGGTCAAT CTCAACAGCT GCATGGAAGG GTTCAATGCC TTGTTCGAAA TAGGCGGGCA GATCTTCGAG CTCGACAAAC AACTTATCAA CCATGAAGCA AACAACGGAG GCTCAGTGAT TCCAACCGCA CGGGCCGACG ACCTTTTACC TCATGATCCT GATAAAAGAT ATACAAAACT CAGAAGAATT GTCCATACGT TGGAGCAACG CGACATCTCA ATTCTCTACA TTATCGGAGG AGAAGGAAGC ATGCGAGCAG CACATGCCAT ATGGACCATT TTCCATAAAA GGTACCCGAA CAAACGCCTC TCTGTGATCG GCATACCTAA AACCATGGAT AATGACATCC TCTGGGTATG GCAATCCATA GGATTTCCCT CTGCGGTTGA AAAAGCACGG CAAATCATCA TTCAGCTTGC CATAGAAGCC ACATCAAACC CCAGAGTCTG CATCATGCAA TTGTTTGGTT CCTCATCCGG TTATGTCGTC AGTCACGCTG CGCTCGCAAG CAATATGTGC GACCTAGCGT TAATTCCCGA ACTGGAATTT TCGATGCACG ATGTTTGTGA ATATATGGGC GCAAAACTAC AAGAACGACG CAATAAGCCA AACACAAGCC CCTATGGTCT CATTGTCATG GCTGAAACCG CTATTCCCAG CGATTTCATG GACTACATCG ATAACAAGAA TGTTGGACTT ACCGAAGATG AAATCACTGC CTTGCATCAC TTCAATGTTA ATAACAGAAA AGTCATCGGT CAAACTCCTG ACCACCTGAG AAATGCTGGA TTAAAAATCG TTTCCAAAAT CCTTGAAACC TATATCAACC AGAGGCTTTC AATCGAATAT AACGACAACT ACTGGAAAAA ATACCGGGTC TTCACCAACG CACCTCGGCA CATTGTACGA TCAGTGGAGC CAAGCACCAA CGACGTAGCC TATGGTATCC GACTCGGCAC CATGGCCGTC GACATGGCCA TGGCTGGCTA TACTGACTGC ATCGTCAGCC AATGGCTCAC CGAATACGTC GCCGTTCCAC TTGAACTTGT CACCCTTGGG AGAAAAGAAG TCCCGCTCGA CGGTATCTTC TGGAAAACAG TCATAGCCAA AACCGGCCAA ATAGAATTCG AATCCCTCTC AGGAATTAAA TAA
|
Protein sequence | MPENALKPPT IFLSYPSKEE SFVARICYYL ERQARVKCYF NPEQKIAGDF EQRIQQAAQE SDYFVLFLSG NTTSSKWQKT ELQHWRKAHP DMLTRIIVVN LHTMMLDDKP NELPPNLERI IISEPEKQGV YCSEQILKLF ALPAAPFDGL PVTIQVLYEK EIINAYMRNN GQLPDTLISK GYPPTWPKVR KIQSSTTSNP LNEKKFGTYR APDSSISVDA RHQTGNNAHC TDTCQLDLTF PEAGPRQTII IPSNPFNVAI LVSGGIAPGI NSIISAIAER HETYQNEYRN TYHIQHHTVN LNSCMEGFNA LFEIGGQIFE LDKQLINHEA NNGGSVIPTA RADDLLPHDP DKRYTKLRRI VHTLEQRDIS ILYIIGGEGS MRAAHAIWTI FHKRYPNKRL SVIGIPKTMD NDILWVWQSI GFPSAVEKAR QIIIQLAIEA TSNPRVCIMQ LFGSSSGYVV SHAALASNMC DLALIPELEF SMHDVCEYMG AKLQERRNKP NTSPYGLIVM AETAIPSDFM DYIDNKNVGL TEDEITALHH FNVNNRKVIG QTPDHLRNAG LKIVSKILET YINQRLSIEY NDNYWKKYRV FTNAPRHIVR SVEPSTNDVA YGIRLGTMAV DMAMAGYTDC IVSQWLTEYV AVPLELVTLG RKEVPLDGIF WKTVIAKTGQ IEFESLSGIK
|
| |