Gene Paes_1209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1209 
Symbol 
ID6459875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1314024 
End bp1315355 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content53% 
IMG OID642725199 
ProductHI0933 family protein 
Protein accessionYP_002015884 
Protein GI194334024 
COG category[R] General function prediction only 
COG ID[COG2081] Predicted flavoproteins 
TIGRFAM ID[TIGR00275] flavoprotein, HI0933 family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00892484 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAATTG AACACGCAAT GAACACTATT TCGGAACGAC ATCGTGCCGA TATTCTTATT 
ATCGGCGGCG GAGCAGCAGG TTTGCTGGCC GCTCTTGCCG CAAGGCGTAA AGCACGCGAG
CGCTCAATTG TCGATAGTGA TTTCCGGATA GTCGTTCTTG AACGTAATGC GCGCCCGGGG
GCGAAGATCA GGATTTCAGG CGGGGGCAAG TGCAACGTGA CCCATGATGG AGCGGTCGGG
GAGATGCTTG TGCAAGGCTT TTTCAGGAAA TCGGAGCAAC GTTTTCTCCG GCCGGCGCTG
TATGCTTTCA CCAATGATGA CCTGCGTCGG ATGTTACGGA AACGAAGTGT TCCAACTGCC
GTTCGTGATG ATGGGAAGGT TTTTCCTGTT TCCGGCCGCG CTTGCGATGT GCTGGCAGCT
ATCGAGGCGG AACTTCGTGA CGCATCGGTT GATGTTGTGA CAGGTACTCG AGTCCGCTCT
TGTCTACGGC AGAATGGTGT GTTTTGTATT CATACGAAAA TGTCGGATTT TTTTAGCAGT
CGCCTTGTCC TGGCCACGGG AGGGGTGTCG TATCGTCATA CCGGAACAAC CGGTGATGGA
TTGCATATTG CGGCATCATT CGGGCACGAT CTTGTGCCGT CGTCACCCTC ACTTGCGCCT
TTTTTTCTTC GCCATCCTGT CGCTGCAGCA TTGTCAGGGG TGGCTTTGCG AGATGTGCAG
CTGTCATTTC GAACGCCTTC AGAAACGGTC TCGCGAAAAG GGGACGTTCT TCTGACCCAT
AAGGGGCTTT CCGGGCCGGC CTGTTTTTCT TTGTCTCGAG ATGCTGCCGA TCTGATGAGG
CGCGAGAGCG GAGGAGAGGC TCTGGTGAAT TTTTTTCCTG ATTTTTCCGC CGAAGATATG
CAGGAAATGC TTCTGCGACA CGCATCAGCT CATGGTAAGC AGTTGATACG TAAATTTCTT
CAGTTGCAGT CGGCAATCCC GTCAGGAATG ATTCCTCTCG TGCTCAAGCA GGCCGCAATA
GAGGGCGATA TCGGCTGGGG CAGTCTGACA AAAAATGCCC GCTGTAGGCT TCAACGAACC
CTTCAAAGTT TTTCGTTTGG GGAAGTTAAA GCGATTCCTC TTGATGCCGG AGAGGTATCA
GCGGGCGGTA TTGCTTTGGG GCAGGTCAAT GCTAAAACCA TGGAGTCAAG GATCTGCAGG
GATCTGTTTC TGTGCGGTGA AATCCTTGAC TACGCCGGTG AGGTTGGAGG TTTTAATCTT
CAGGCTGCAT TTTCAACCGG ATGGCTTGCG GGCTCTTCTT CTGCTTCCGG ATCAGCCGGC
ACAGGAGTAT GA
 
Protein sequence
MPIEHAMNTI SERHRADILI IGGGAAGLLA ALAARRKARE RSIVDSDFRI VVLERNARPG 
AKIRISGGGK CNVTHDGAVG EMLVQGFFRK SEQRFLRPAL YAFTNDDLRR MLRKRSVPTA
VRDDGKVFPV SGRACDVLAA IEAELRDASV DVVTGTRVRS CLRQNGVFCI HTKMSDFFSS
RLVLATGGVS YRHTGTTGDG LHIAASFGHD LVPSSPSLAP FFLRHPVAAA LSGVALRDVQ
LSFRTPSETV SRKGDVLLTH KGLSGPACFS LSRDAADLMR RESGGEALVN FFPDFSAEDM
QEMLLRHASA HGKQLIRKFL QLQSAIPSGM IPLVLKQAAI EGDIGWGSLT KNARCRLQRT
LQSFSFGEVK AIPLDAGEVS AGGIALGQVN AKTMESRICR DLFLCGEILD YAGEVGGFNL
QAAFSTGWLA GSSSASGSAG TGV