| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0997 |
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| Symbol | secA |
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| ID | 6459003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 1097259 |
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| End bp | 1100354 |
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| Gene Length | 3096 bp |
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| Protein Length | 1031 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642724996 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_002015683 |
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| Protein GI | 194333823 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.407169 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAAAA TTTTCACGAA GCTCTTTGGT TCGAAGCACG ATAAAGACAT AAAAAAAATC
CAGCCGACGA TTGAGCGCAT CAATGAAATA TTTTCCTCCC TTTCCTCATT GAGCGATGAT
GAGCTGCGTT TAAAAACCGC TTCACTCAAA GATCGGATAC AATCAGCTCT GGCTGAAACA
GAACAGAAAC GCAACGATCT CGAACAGAAA CTCGACAATC CTGAGCTTGA TCTCAATCAG
GCTGACAACA TTAATCAGGA ACTCGACACG CTCGACACGC AATTTGAAGA AAAAACCGCT
GCCATTCTCG AGGAAATCCT GCCCGAAACG TTCGCTATTG TCAAAGAAAC ATGTCGCAGG
CTCAAGGGTC TTGAATACAA CGTTGTCGGA CACTCAATGA CATGGGACAT GGTCCCCTAC
GATGTTCAGC TTATAGGCGG CGTTGTGCTG CACAGCGGCA AGATATCGGA AATGGCTACC
GGAGAAGGGA AAACCCTCGT TTCAACACTG CCTGCATTCC TCAATGCTCT GACAGGAAGA
GGCGTTCATA TTGTCACTGT CAACGACTAT CTGGCTCAGC GCGACAGAGA GTGGATGAAG
CCGGTATTTG ACTTCCACGG CCTCAAAACA GGTGTTATCC TCACGAGTAT GAAGCCCCAG
GAACGCCGTG AACAGTACCT CTGCGATATC ACCTATGGCA CCAACAATGA ATTCGGTTTT
GATTATCTGC GCGACAATAT GGCCGGAGCA CCCGCAGATC TCGTACAGCG CCCGTTCTAC
TATGCAATCG TTGACGAGGT TGACAGTGTC CTGATCGACG AGGCAAGAAC GCCGCTGATC
ATCTCAGGCC CGGTTCCTCA TTCCAATACC GATAAATTCA TTGAAATCCA GCCATGGATC
GAACGCCTGG TCAAATCCCA GCAGAACCTT GTGGCGGGGT ATCTGACCGA TGCTGAAAAA
GCGCTCAAAA ACAAAGCGGA CGACTTTGAT GCAGGACTTG CTCTGCTGCG AGTCAAGCGA
GGACAGCCGA AAAACAAACG CTTCATCAAA GTGCTCTCAC AGACTGGAAT AGCAAGGCTT
ATCCAGAATG TTGAAAACGA GTACCTGAAA GATAACGCAA GCCGGATGCA GGAGGTCGAT
GACGAACTCT TTTACTCCGT CGATGAAAAA ACCGGAACGA TCGACCTCAC CGACAAAGGA
CGTGATTTTC TCAGCCAGCT CAGCAAGCAG GACAGTGATA TCTTCCTGGT TCCCGATGTC
GGTGCTGAAA TCGCGATCAT TGAAGCCGAA AAGACTCTCT CCGCGGAAGA AAAAATCAAA
CGGAAAGATG ATATCTACCG CCTGTTTTCG GAACGCTCCG AACGACTCCA CAACATCAGC
CAGCTGCTCA AGGCCTATTC ACTGTTCGAC AGGGATAGCG AATATGTTGT CCAGAACGGC
CAGGTAATGA TTGTCGACGA GTTCACAGGA AGAATCCTTC CCGGACGCCG CTACAGCGAC
GGTCTCCATC AGGCCATCGA GGCAAAGGAG AATGTCAAGA TTGAAGGAGA GACCCAGACA
CTGGCAACGA TCACTATTCA AAACTATTTC CGCCTCTATA AAAAACTTGG AGGCATGACA
GGAACTGCTG AGACCGAATC ATCAGAGTTT TTCGAAATCT ACAGCCTCGA CGTCGTCGTT
ATTCCGACAA ACAAACCGAT TCAGCGTCAT GACCTCAATG ATTTCGTCTT CAAAACGCGG
CGTGAAAAAT ACACGGCAAT CATTGGCAAA ATCATCGAAC TCCAGGAAAA AGGTCAACCG
GTACTTGTCG GTACCGCCAG TGTTGAAGTA TCTGAAACAC TATCGAGAAT GCTAAGGGCG
AAAAAAATAC GCCACAGTGT CCTCAACGCA AAACAGCATG AGCAGGAAGC AGAGATTGTT
GCCCACGCAG GTGAAAAAGG TGCCGTAACG ATTGCGACCA ACATGGCAGG ACGCGGTACA
GACATCAAAC TCGGCCAGGG AGTGAGGGAA AGCGGCGGAT TGTTCATCCT CGGATCGGAA
CGACACGAAT CCAGAAGAAT CGATCGCCAG TTGCGAGGCA GGGCCGGACG TCAGGGCGAT
CCGGGAGAAT CGATCTTCTA CGTCTCTCTC GAAGACAATC TGATGCGCCT TTTCGGATCC
GAAAGGGTTA TCTCCGTCAT GGACCGCCTT GGCCATGAAG AAGGAGATAT CATCGAACAC
CCGATGGTCA CAAAATCAAT AGAGCGTGCC CAGAAAAAGG TTGAAGAACA GAACTTTGCC
ATTCGAAAAC GCCTGCTTGA ATACGATGAC GTCCTCAATC AGCAGCGCGA AGTGATCTAC
AAACGGCGCC GTAACGCCCT CATCAAGGAA CGTCTGACAG CAGATATTTT CGACCTCCTG
CACGATCACG CCACAAAAGT GATTGAAAAA TATCATCCGA ACGCAGACGT CGACGGACTC
GAAGAACAGG TTCTGCGCGA ACTTTCGGTC GAATTCAAAA TAGAAAGTGA CGAGTTTGAA
AAGAACTCAG TCGAAGAAAA TGCCGACAAG CTTTTCCAGA CCGCTATCGC GTTCTACAAG
CGTAAAGAGG AGATGGTTCC TTCCAACATC ATGCGCCAGA TTGAACGCTA TGCCGTCCTG
AGTGTCATCG ACCAGAAATG GCGTGAACAC CTGCGGGAAA TCGACTCGGT CAAAGAAGGC
ATCAACCTCA GAGCGTACGG TCAGAAAGAC CCTCTTCTCG AATACAAACA GGAGGCCTAT
CGACTGTTTG TCGAACTGCT CAGGGAGATC GAGCTTGAAA CACTCTCTCT CGCGTTCAAA
CTCTTCCCCG TGACCCCTGA AGCCCAGGAG CAGATCGAGG AACGACAGAA AATGTCGCAG
GTGCGCAAAG AACGGCTCGT AGCAAAACAC GAAGAATCGC AAGGAGCGTT AAATGCCGCC
GCTGCACAAC GCGCCGAACG CCCATCGTCA TCAGACCCGG CCGCCGAAAA AGCCGGAACA
ACCGCCCAGC CGGTCAAAGC CGAACAGACT CCGGGCAGAA ACGATCCATG CCCGTGCGGA
AGCGGAAAAA AATATAAAAA CTGCTGCGGC AGGTAA
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| Protein sequence | MLKIFTKLFG SKHDKDIKKI QPTIERINEI FSSLSSLSDD ELRLKTASLK DRIQSALAET
EQKRNDLEQK LDNPELDLNQ ADNINQELDT LDTQFEEKTA AILEEILPET FAIVKETCRR
LKGLEYNVVG HSMTWDMVPY DVQLIGGVVL HSGKISEMAT GEGKTLVSTL PAFLNALTGR
GVHIVTVNDY LAQRDREWMK PVFDFHGLKT GVILTSMKPQ ERREQYLCDI TYGTNNEFGF
DYLRDNMAGA PADLVQRPFY YAIVDEVDSV LIDEARTPLI ISGPVPHSNT DKFIEIQPWI
ERLVKSQQNL VAGYLTDAEK ALKNKADDFD AGLALLRVKR GQPKNKRFIK VLSQTGIARL
IQNVENEYLK DNASRMQEVD DELFYSVDEK TGTIDLTDKG RDFLSQLSKQ DSDIFLVPDV
GAEIAIIEAE KTLSAEEKIK RKDDIYRLFS ERSERLHNIS QLLKAYSLFD RDSEYVVQNG
QVMIVDEFTG RILPGRRYSD GLHQAIEAKE NVKIEGETQT LATITIQNYF RLYKKLGGMT
GTAETESSEF FEIYSLDVVV IPTNKPIQRH DLNDFVFKTR REKYTAIIGK IIELQEKGQP
VLVGTASVEV SETLSRMLRA KKIRHSVLNA KQHEQEAEIV AHAGEKGAVT IATNMAGRGT
DIKLGQGVRE SGGLFILGSE RHESRRIDRQ LRGRAGRQGD PGESIFYVSL EDNLMRLFGS
ERVISVMDRL GHEEGDIIEH PMVTKSIERA QKKVEEQNFA IRKRLLEYDD VLNQQREVIY
KRRRNALIKE RLTADIFDLL HDHATKVIEK YHPNADVDGL EEQVLRELSV EFKIESDEFE
KNSVEENADK LFQTAIAFYK RKEEMVPSNI MRQIERYAVL SVIDQKWREH LREIDSVKEG
INLRAYGQKD PLLEYKQEAY RLFVELLREI ELETLSLAFK LFPVTPEAQE QIEERQKMSQ
VRKERLVAKH EESQGALNAA AAQRAERPSS SDPAAEKAGT TAQPVKAEQT PGRNDPCPCG
SGKKYKNCCG R
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