Gene Paes_0916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0916 
Symbol 
ID6460786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1004766 
End bp1006598 
Gene Length1833 bp 
Protein Length610 aa 
Translation table11 
GC content50% 
IMG OID642724919 
Productbiotin/lipoyl attachment domain-containing protein 
Protein accessionYP_002015606 
Protein GI194333746 
COG category[C] Energy production and conversion 
COG ID[COG5016] Pyruvate/oxaloacetate carboxyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.345122 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TAAAATTTAT GGACGTCTCC TTCCGTGACG GGTTTCAGTC CTGTTATGGA 
GCAAGGGTCA AGACTGATGA TTTTCTGCCT GTTCTTGAAG CTGCAGTCAA TGCCGGGACG
GATAACTTTG AAATCGGAGG CGGTGCGCGT TTCCAGAGCC TGTATTTCTA TTGCCAGGAA
GATGCTTTTG ATATGATGGA CCGTGCCCGT GAGGTTGTCG GTCCGGACAT CAATCTTCAG
ACCCTCGCAA GAGGAGCCAA TGTTGTCGGT CTGGTTTCCC AGTCCCGGGA TATCATCGAT
CTTCATGCCC GCATGTTCAA GAAGCACGGC ATCACAACGA TCAGAAACTT CGATGCGTTG
ATGGATGTGC GAAATATCGC TTACTCGGGT CAGTGCATTC ATAATGCCGG ATTGAAACAT
CAGGTCGTTA TAGCTCTGAT GGGACTTCCT CCCGGATTGA AGGAGACCTA TTGCCATACC
CCGCAGTTCT ATCTGGACAA GCTGAAAGCG ATCCTTGATG CAGGTATTCC ATATGACAGT
GTGGCCTTCA AAGATGCTTC AGGAACGACT ACCCCTGCAG TTGTCTATGA GTCTATCAAG
GGTGCAAGAA AGATGCTCCC GGAAGGGACC GTCATTGAGT TTCATACTCA TGATACTGCA
GGTATGGGGG TTGCGTGCAA CTTTGCCGCT ATTGAAGCGG GAGCCGATAT TATCGACCTT
GCGATGGCTC CGGTAAGCGG TGGTACCGCT GAGGTTGATA TTCTCACCAT GTGGCACAGG
CTTCGGGGTA CCGATTACAC TCTCGATATC GATCATGAAA AGATCATTGA GGTCGAGGCG
ATGTTTATCG ATCATATGGA TAAGTACTAT ATGCCGCCCG AAGCCAAAGA GGTTAATCCG
GTTATTCCGT TTTCGCCAAT GCCCGGTGGT GCTCTGACTG CAAACACGCA GATGATGCGC
GACAACAACT CTCTGCATCT TTTCCCCGAA GTGATCAGAA ACATGCGGGA CGTTGTTGCA
AAAGGTGGAT ACGGTTCTTC GGTTACCCCG GTATCCCAGT TTTATTTTCA GCAGGCATTT
GCTAATACCG TTCAGGGGCC ATGGAAAAAG ATTACCGAAA GTTATGGTAA GATGGTTCTC
GGTTATTTCG GCAAGACCCC GGCAGCGCCT GATCCGGAAA TTGTCAAACT TGCTTCAGAG
CAGCTTGGCC TTGAGCCGAC AACAGAGGAC GTGCACGATA TCAACGATCG TAATCCTGAA
CTGGGTATCG AGTACAATAA GAAGATGCTT GAGAAAGATG GCCTGCCGCT CAGCGAGGAA
AATATCTTTA TTTCAGCAAC CTGTGGAGCC AAAGGGATCG CATTTCTTAA AGGAGACGGA
CCTCTCGGCA TCCGTTACAA GGCTGATGTT GAAGCTGAAG CCGCCAAAAA AGTCATGCCG
AAAGCACCTG CCAATGCGCC TGCCGCACCC GCACCGAAAT CATCGAGCGG CAACTATACT
GTTACCGTCG ATGGCCATGC CTACAACGTG ACTGTTGCAG AAGGTAGCGG CGCAGTGCAG
TCCATTGCTC CCGTTACGCC GGCACCGGTT GCTTCGGGCA GTGCCGCATC CTCAGGAGAT
GGGACGCCTG TCGAATCGGC TATGCCCGGA ACCGTGATCG CAATAGAGGT CGAGGTCGGT
GATATGGTGA ATGAGGGTGA CGATGTTCTG GTGATCGAAG CAATGAAAAT GGAGTCACCG
GTCAAGGCAC CGAAGTCAGG AAAAGTCATT TCGATAGAGG TTTCCAGCGG TGATGCCATC
GCTTCAGGCG ATGTGTTGAT GTATATCGGT TAA
 
Protein sequence
MKKIKFMDVS FRDGFQSCYG ARVKTDDFLP VLEAAVNAGT DNFEIGGGAR FQSLYFYCQE 
DAFDMMDRAR EVVGPDINLQ TLARGANVVG LVSQSRDIID LHARMFKKHG ITTIRNFDAL
MDVRNIAYSG QCIHNAGLKH QVVIALMGLP PGLKETYCHT PQFYLDKLKA ILDAGIPYDS
VAFKDASGTT TPAVVYESIK GARKMLPEGT VIEFHTHDTA GMGVACNFAA IEAGADIIDL
AMAPVSGGTA EVDILTMWHR LRGTDYTLDI DHEKIIEVEA MFIDHMDKYY MPPEAKEVNP
VIPFSPMPGG ALTANTQMMR DNNSLHLFPE VIRNMRDVVA KGGYGSSVTP VSQFYFQQAF
ANTVQGPWKK ITESYGKMVL GYFGKTPAAP DPEIVKLASE QLGLEPTTED VHDINDRNPE
LGIEYNKKML EKDGLPLSEE NIFISATCGA KGIAFLKGDG PLGIRYKADV EAEAAKKVMP
KAPANAPAAP APKSSSGNYT VTVDGHAYNV TVAEGSGAVQ SIAPVTPAPV ASGSAASSGD
GTPVESAMPG TVIAIEVEVG DMVNEGDDVL VIEAMKMESP VKAPKSGKVI SIEVSSGDAI
ASGDVLMYIG