Gene Paes_0459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0459 
Symbol 
ID6460063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp491910 
End bp492416 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content43% 
IMG OID642724458 
ProductNusB antitermination factor 
Protein accessionYP_002015162 
Protein GI194333302 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.730016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCTC ATCGACGACA CATACGCGAA AAAATTGTAC AGGCGCTCTA CACCCTTGAC 
GTTCGCGATA CCGATACCGC AACGGCTGGA GACTGGCTGA TCACACCGGA AATATCAAAG
GATCCCAAGG CTATCAGGTT TTTCAAACAG CTGCTGGGAG CTATTGTGGA CAACAGGGAA
GAGATCGATC AATATATCTC AAAGCATACC TTCAACTGGG ATATGAGCCG GATCGCCATC
ATTGATAAAA ACATACTTCG AATGGCCATG GCGGAAATTC TCTATTTCGA AGATATTCCT
CCAAAAGTAT CGATCAATGA AGCTATCGAG ATCGCAAAAA AATTCAACAG CACGGACAAA
AGCAGTAAAT TTGTCAACGG AATTCTCGAC GCCGTTTATA ACGACCTGAA CAAATCAGGA
AAAATAAATA AATGCGGCCG GGGGCTGATT GATCAATCAA GCAATCTGAA AAAAAATAAA
GAAAAGAGCC CGTCTGATGA TCAATAG
 
Protein sequence
MKAHRRHIRE KIVQALYTLD VRDTDTATAG DWLITPEISK DPKAIRFFKQ LLGAIVDNRE 
EIDQYISKHT FNWDMSRIAI IDKNILRMAM AEILYFEDIP PKVSINEAIE IAKKFNSTDK
SSKFVNGILD AVYNDLNKSG KINKCGRGLI DQSSNLKKNK EKSPSDDQ