Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0418 |
Symbol | |
ID | 6458411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 452653 |
End bp | 454614 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642724418 |
Product | putative NADPH-dependent glutamate synthase small subunit |
Protein accession | YP_002015122 |
Protein GI | 194333262 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACTG TTTCACTGAC TCTGAACGGG AAAACCATTA CAGCCGATGC TCATGTCTCA ATTCTGGAGG CAGCCAAAAG CAATGGCGTT ATCATTCCAA CGCTCTGTTT TCATCAGGAA CTCAGTGCTC TGGGGTCTTG CTGGATGTGC ATTGTCGAAC TCAAGGGTAA AAACCGTTTT GTCCCGGCCT GCAGCACCAG GGTAACCAGC GGGATGGATA TTGAAACCGA CAACCCGGAA CTGCATGCAA TGCGCCGCAA AACCCTTGAA CGGCTCATTG ATCAGCATTG CGGCGATTGC CTGGGACCGT GCGAAACAGC GTGCCCTGCC GGCTGCGACA TTCCGGGCTA TACGGCAGCT ATCGCCAGAG GCGATGACCG CGAAGCAATC CGGATTATCA AAGAAACCGT TCCTCTTGCT GCATCTCTTG GCAGAATATG CCCGGCTCCA TGTGAAGATG CCTGCCGTCG TCACGGCGTC GACGATCCAG TCTCGATCTG TGCCTTGAAA CGCTTTGCCG CTGATAAAGA CATCGCGTCA GCCGAACCGT TCGTTCCCGA AAGAAAAAAA GCGTCAGGCA AAAAAGTCGC CGTCATCGGA GCCGGCCCTG CAGGCCTTAC AGCCGCGTAC TACCTGCTTC GAAATGGTCA CGATGTCACT GTTTTCGATG CAAACGACAC ACCGGGCGGC ATGCTCTATT ACGGCATTCC GCGATTCCGC CTCCCTGCGA CGATCCTTGA AGCCGACATT GCCCCCCTGC GGGCTATGGG TGGAGAAATC GTTCTCAATA CCGTTCTGGG GCGGGATATC TCCCTGAAAG AGCTGAAAAA AAATGGTTTT GATGCAACCT ATATCGCCGT AGGAGCTGCC AAAGCATCGA CAATGGGTAT TGCCGGAGAA GAACTTCCCG GAGTCGTTTC CGGAATCGGA TTTCTCAGGG ATATAGCCTC GGGAAAAGCG GTACGGACAG GAAAAAGGGT TGTTGTTGTC GGAGGCGGGA ACACGGCTGT CGATGCAGCA AGAACAGCCC TCCGAACCGG AGCTGAATCG GTCACCATTA TCTATCGAAG AACTCGTGAA GAGATGCCTG CCAACCAGGC TGAAATCGAG GAAGCCCTTG CCGAAGGCAT CGCTCTGCAA TGCCTTGCCG CTCCATCGGC CATAACCTCC TGTGAAAGCG GCCTGGAAAT GACCGCACTG AAGATGCTGC AGGGCGAACC TGATGAAAGC GGACGCCGAC GCCCTGTTGC CTTAAACGGC TCGGAGTTCT CTCTCTTTGC CGACACGATC ATTGCCGCTA TCGGCCAGTA TGTCGATCCT GAAATCCAGA CCGCAACAGG GTTGCAACTA TCGCAAAAAG GCACCTTCAA GACCGACAGT GCCACATGCA TGACAGAACA GGAGGGCGTC TTTGCGGGAG GAGACTGCGT TATCGGTGCC GATATCGCCA TCAATGCCAT CGAGCAGGGA AAACGTGCAG CAGACGCTAT CGACAGCTTT CTCAACGCCG TCACTTCCCG GAACGAGAAA AAACCCTTCA ACTCAACCTA CGGACCAAGG GATAACGCCC CTGAAACATT TCTTATGCGG GCAAAACCCA TCAAACGCGC GTCGATGCAG GAACTTCAAG GACCTGAAAG AACATCGACA TTCCGCGAGG TCGCCCTTGG CCTTGACGAA GAACAGGCGC GTCTTGAGGC GCAGCGATGC CTGCGATGCA GCTGTACGAC AAAAAACAAC TGCTCGCTCC GCCGCCTGGC TTCACGCTAT GAGGTATCGT CAGCGCAATG CGATGTCGAA ACGCATGACA ACGCCTATAT TACCCGCGGA AATGGAATAC GGTTTGAACG GGAAAAATGT GTTGATTGCG GCATCTGCGT GCGAACCATC GAAGAATACG GTCCTGAAGA GCTCAGGAGC ACAATCCTCA TAGAACGCTG CCCTACCGGA GCACTGAGCT AA
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Protein sequence | MATVSLTLNG KTITADAHVS ILEAAKSNGV IIPTLCFHQE LSALGSCWMC IVELKGKNRF VPACSTRVTS GMDIETDNPE LHAMRRKTLE RLIDQHCGDC LGPCETACPA GCDIPGYTAA IARGDDREAI RIIKETVPLA ASLGRICPAP CEDACRRHGV DDPVSICALK RFAADKDIAS AEPFVPERKK ASGKKVAVIG AGPAGLTAAY YLLRNGHDVT VFDANDTPGG MLYYGIPRFR LPATILEADI APLRAMGGEI VLNTVLGRDI SLKELKKNGF DATYIAVGAA KASTMGIAGE ELPGVVSGIG FLRDIASGKA VRTGKRVVVV GGGNTAVDAA RTALRTGAES VTIIYRRTRE EMPANQAEIE EALAEGIALQ CLAAPSAITS CESGLEMTAL KMLQGEPDES GRRRPVALNG SEFSLFADTI IAAIGQYVDP EIQTATGLQL SQKGTFKTDS ATCMTEQEGV FAGGDCVIGA DIAINAIEQG KRAADAIDSF LNAVTSRNEK KPFNSTYGPR DNAPETFLMR AKPIKRASMQ ELQGPERTST FREVALGLDE EQARLEAQRC LRCSCTTKNN CSLRRLASRY EVSSAQCDVE THDNAYITRG NGIRFEREKC VDCGICVRTI EEYGPEELRS TILIERCPTG ALS
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