Gene Paes_0180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0180 
Symbol 
ID6460283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp187364 
End bp187894 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content48% 
IMG OID642724172 
Productprotein of unknown function DUF177 
Protein accessionYP_002014886 
Protein GI194333026 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.112746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAAGG AAAAAAGTTT GATTGAGATC AGAATTGCAG AGTTAAACCA AGGTGTCCAT 
GAATACACCT TCACCTGCAA AGCATCGGAT TTTAAAAATC CCGAGATTGA GGAACCGGCT
TTCAACGGAG ATATTCAGGT AACGGTAGCT GCAAAAAAAA CCGATACCGA GATCGTCACC
GCAATAGAAA CGGTTACCGA TGCCGAACTC AGCTGCGATA TCTGTCTGGC CCCTGTTCAC
AGAAGGCTGT CCGGACAGTT TACCATCTTT TTTGTTTTTG GCAACCAGGG CAATGAAGCC
CATGAAACTG ATGGGGAATA TCGCACGCTG CCGCCGAGCG CAACCGCGAT CGATCTGACT
GAGGATGTGC GCGAAACGCT GCTGCTCTCC CTGCCGGTCA AAGTAGTTTG TGAAGCCTAT
CCGGAATGCA ACGCGTTACG CACTGATGAA GAAACGCAAA CCGAAGACGA TCAGACTCAG
AACAGCAACT GGAAAGCATC GCTCCAAGAG TTAAAACATA AATTTCACTA A
 
Protein sequence
MRKEKSLIEI RIAELNQGVH EYTFTCKASD FKNPEIEEPA FNGDIQVTVA AKKTDTEIVT 
AIETVTDAEL SCDICLAPVH RRLSGQFTIF FVFGNQGNEA HETDGEYRTL PPSATAIDLT
EDVRETLLLS LPVKVVCEAY PECNALRTDE ETQTEDDQTQ NSNWKASLQE LKHKFH