Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04151 |
Symbol | |
ID | 6304372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 859317 |
End bp | 860759 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642638150 |
Product | major extracellular endoglucanase |
Protein accession | YP_001912032 |
Protein GI | 188575103 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2730] Endoglucanase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCATCT TCAGAGCTGC AAATACACTT GCATTGGCAA CTATATTAGC GCTAACCACC GCTCCGGCTT TCAGCTATTC GATCAGCAAA AACAAGATCG TCGACGACAA AGGCAAAGTG GTTCAGCTCA GGGGAGTCAA CGTCTCCGGC TTCGAGAGCG CCAGCCATGT CATGGATGGC CTGTGGGTAC GCAATTGGAA AGAGATGATC AACCAGATGC AGGGCTTCGG CTTCAATGCC GTGCGCCTGC CGTTCTGCCC CGCCACGCTG CGTAGCGACA CCATGCCCAG CAGCATCGAC TACAGCCGCA ACGCCGACTT GCAGGGCCTG ACGTCGCTGC AGGTCCTCGA CAAGGTGATC AACGAATTCA ACGCGCGCGG CATGTATGTG CTGCTGGATC ACCACACTCC CGATTGCGCC AGCATTTCCG AGCTGTGGTA CACCGGCACG TATTCCCAAG CGCAATGGCT GAACGATCTG CGCTTTGTTG CCAATCGCTA CAAGAACGTG CCGAGCGTGA TCGGCGTGGA TCTGAAGAAC GAGCCGCACG GCGCCGCTAC CTGGGGCACC GGCAATGCTG ACACCGACTG GAACAAGGCC GCCGAGCGTG GCGCGGCCGC CGTCCTGGCG GTAGCGCCGA AGTGGATCAT TGCGGTGGAA GGCATCACCG ACAACCCGGT GTGTTCGACC AATGGCGGCA TCTTCTGGGG CGGCAGCCTG CAGCCGCTGG CCTGCACCCC ATTGAACATT CCGGCCAACC GCCTGTTGCT GGCACCGCAT GCGTACGGCC CGGATGTCTA CGTGCAATCG TACTTCAACG ACAGCAACTT CCCCAACAAC ATGCCCGCCA TTTGGGACCG TCACTTCGGT CAGTTCGCCG GTAATCATGC GCTGCTGCTC GGCGAATTCG GCGGCAAGTA TGGCGAAGGC GATGCGCGCG ACAAGGTGTG GCAGGACGCG CTAGTGAAGT ACCTGCGTAG CAAGGGCATC AACCAAGGGT TCTACTGGCC GTGGGGCCCC AACAGCGTCG ACACCGGTGG CATCCTGCGC GACGACTGGA CCACGGTGCG CAAAGACAAG ATGACCCTGC TGCGGACGCT ATGGGGCACC AAACCGACAC CGACACCAAC GCCAACCCCA ACCCCAACCC CAACGCCAAC GCCAACGCCA ACGCCGACAC CAACGCCGAG CGCTAGCTTC AGCACCAAGG TGATCCAGGA CAGCACGTGG AACGGTGGCT ACTGCAACAG CGTGCAAGTC ACCAATACCG GCACCGCCAG CGGCACGTGG TCGATCTCGC TGACGGTCAC CGGCACAGTC AACAATGCCT GGAATGTCAC CTGGTCGCAG AGCGGTACCA CGCTGCAGGC AAGCGGCGTT GACTTCAACC GCACCCTGGC TGCCGGTGCA ACGGCCGAGT TCGGCTACTG CGCGGCAAGC TGA
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Protein sequence | MSIFRAANTL ALATILALTT APAFSYSISK NKIVDDKGKV VQLRGVNVSG FESASHVMDG LWVRNWKEMI NQMQGFGFNA VRLPFCPATL RSDTMPSSID YSRNADLQGL TSLQVLDKVI NEFNARGMYV LLDHHTPDCA SISELWYTGT YSQAQWLNDL RFVANRYKNV PSVIGVDLKN EPHGAATWGT GNADTDWNKA AERGAAAVLA VAPKWIIAVE GITDNPVCST NGGIFWGGSL QPLACTPLNI PANRLLLAPH AYGPDVYVQS YFNDSNFPNN MPAIWDRHFG QFAGNHALLL GEFGGKYGEG DARDKVWQDA LVKYLRSKGI NQGFYWPWGP NSVDTGGILR DDWTTVRKDK MTLLRTLWGT KPTPTPTPTP TPTPTPTPTP TPTPTPSASF STKVIQDSTW NGGYCNSVQV TNTGTASGTW SISLTVTGTV NNAWNVTWSQ SGTTLQASGV DFNRTLAAGA TAEFGYCAAS
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