| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03420 |
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| Symbol | hpaF |
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| ID | 6303581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 56059 |
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| End bp | 57495 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642637375 |
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| Product | HpaF leucine rich hrp associated protein |
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| Protein accession | YP_001911260 |
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| Protein GI | 188574331 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCTCT ATACCGGGGT TCAGTCGCTG CCAGACAGCC TGGGACAGCT GAGCCAGCTC
CACCATTTGC AGATCTCTGG CGCGCAGGAG CTGAAAACAC TGCCACCCTC GTTGACGCGC
CTGTCCAATC TCAGAACCCT TCAATTGATG ATGGTCCCCT TGGACGAATT GCCCGCAGAC
CTTGGGCGCA TGCAGGGTCT GCGCAGCCTC GCGCTAGGTG GCGGGCACTA TGCGCGTCTG
CCGGCCAGCA TCGTTGAACT GAGCCGGTTG ACCGGTTTGC GCGTGTCGCA CTCGTCGCAT
TTTCGCGAGT TACCTGAAAA CATCGGCCTC ATGCAGGGGC TCAGGTCACT GGAGTTGGCA
TCGAATTCCA AGCTGGAGCA GCTTCCAGGC AGCCTCACGC AGCTGCATCG GCTGAAGAAA
CTCGACCTGT CGTCCAACCG CCGGCTGGCG CACTTGCCTG AGGACATCGG TCAACTGCGC
GGCTTGACGG AACTGTCGCT GAAAAGTTGC GCTGCGCTGC GGCAGCTGCC CGGCAGCGTG
GGGGATCTGG CCCAGCTGCA ACTGCTGGAC CTGCGCGGCA CTGGCCTGCA GACCCTTCCA
CCGTGGCTGG CACGACTGCC CGATCGCTGC GACATTAAGG TGTCGGATCA TCTGGCAGAC
CAATTGCAGC AGATCCGCGA CCCGGAACGC GCGCAGCGCG CGGCACAGCG GCTTGCCGAC
AGGAGACGAC ACGCGTCCGT GCCGGCGGCG CAACAGGCCG GGGCGTCGTG GAACCGCGTC
CCCGAGTTCA CGCGCGTGTT GCGCAGTGTC GATGCCGACC TGGGCGAGCG TTTTGAGAAG
TGGACGCAAG GCCTGACGCA AAATGCCAGG ATCTTCGGCG CATCCATCAC ATCGGCCGAC
ATGCCCCTGC TGGACCAGGT GGTGGCCGAG GCCATTCGAT CACCCGAATT CCGCAGCACC
TTCGGCCAAT TCTTGAACGA CCACACCGTC AAGACGCTCA ACATGGATGG CATGACGCAA
GTGGGTGATG GCGGGCCCCG TGTGCGAGGA GACGTCAAAA CCGCGTTTGC CGAGATGCTC
AAGCACAACA TCATGCACAC GCAGGACCAG GAGACCGCAC TGGGCCTGCT GCAGCAAGCC
CTTCAAAATT CCGGCCTGGG GCTGGCCAGG GAGAGGCTGC TGCGCAGCAC GAATCAACTC
ACCGGGCGTG CGGAAATGTG GCCGCCACTG AAGGCCTACA TCTCCATGCA CGACGTGGAG
GGAAAAGCGG CGCAGGATGC GGCGATCACG TGGGCGATGG CTCAGCTTGA CGAAGCGCAT
GAGGGTGTCA TCGGGGAAGC AGAGGCCAAG CAGGAGTCCG AACAGGCGCA GGCCAACGCG
AACCGCTTCA TCGAGCGGCG GGCGCGTGTA CTGCTCCGGG AATGGGGCAT CCATTAG
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| Protein sequence | MLLYTGVQSL PDSLGQLSQL HHLQISGAQE LKTLPPSLTR LSNLRTLQLM MVPLDELPAD
LGRMQGLRSL ALGGGHYARL PASIVELSRL TGLRVSHSSH FRELPENIGL MQGLRSLELA
SNSKLEQLPG SLTQLHRLKK LDLSSNRRLA HLPEDIGQLR GLTELSLKSC AALRQLPGSV
GDLAQLQLLD LRGTGLQTLP PWLARLPDRC DIKVSDHLAD QLQQIRDPER AQRAAQRLAD
RRRHASVPAA QQAGASWNRV PEFTRVLRSV DADLGERFEK WTQGLTQNAR IFGASITSAD
MPLLDQVVAE AIRSPEFRST FGQFLNDHTV KTLNMDGMTQ VGDGGPRVRG DVKTAFAEML
KHNIMHTQDQ ETALGLLQQA LQNSGLGLAR ERLLRSTNQL TGRAEMWPPL KAYISMHDVE
GKAAQDAAIT WAMAQLDEAH EGVIGEAEAK QESEQAQANA NRFIERRARV LLREWGIH
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