Gene PXO_03180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_03180 
Symbol 
ID6308002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand+ 
Start bp4614611 
End bp4615246 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content65% 
IMG OID642641729 
Productlipoprotein, putative 
Protein accessionYP_001915566 
Protein GI188578637 
COG category[R] General function prediction only 
COG ID[COG3218] ABC-type uncharacterized transport system, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.3551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCTGT TGCGTCCCTT GCTGTGCGTC TCGTTACTGG CGCTGGGCGG CTGCTCAGTC 
CTGACCGGCG GCGACCAGAA GCCGGCCACG ATCTATTCGC CCACCGTGCG GGTCAGCCCG 
AATCCGGCAT GGCCACAGGT GGCATGGCAG CTGGTGGTGG CCAAGCCCAG CGCCGCACGC 
ATCATCGACA GCCCGCGCAT CAATGTGCGC CCGACCCCTG GCGAATTGCA GGTCTATCAA 
GGCGTCGGCT GGGCGCAGCC AGCCACCGAC ATGCTGGAAG ACAACGTGGT GCGCGCCTTT 
GAAGACTCCG GCAAGATCGC CGCGGTGGCC CATATCGGTA CCGGCATCCG CTCCGATTAC 
AAGCTGGCAA TCGACCTGCG CCGCTTCGAA TCCGATTACG CCAGCCAGTC GCTGCCGTCG 
GCAACGATCG AGTTCAATGC AAAACTGCTG CATTCGACCG ATCAACGCGT GGTCGCCTCG 
CGCACCTTCC TGGTCGCACG CCCGTCCACC AGCACCGATA CCGCCGCCGT CGCCGTCGCG 
TTCGAGCAGG CGCTGACCCA GGTCACCACC GAACTGGTCG GCTGGACGCT GACCACTGGG 
CAACAGGACA GCCAGCACTT GCCGCGGTCG TTGTAA
 
Protein sequence
MRLLRPLLCV SLLALGGCSV LTGGDQKPAT IYSPTVRVSP NPAWPQVAWQ LVVAKPSAAR 
IIDSPRINVR PTPGELQVYQ GVGWAQPATD MLEDNVVRAF EDSGKIAAVA HIGTGIRSDY 
KLAIDLRRFE SDYASQSLPS ATIEFNAKLL HSTDQRVVAS RTFLVARPST STDTAAVAVA 
FEQALTQVTT ELVGWTLTTG QQDSQHLPRS L