| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02800 |
|---|
| Symbol | |
|---|
| ID | 6308393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 5002520 |
|---|
| End bp | 5003713 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642642116 |
|---|
| Product | ABC transporter sodium permease |
|---|
| Protein accession | YP_001915946 |
|---|
| Protein GI | 188579017 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1668] ABC-type Na+ efflux pump, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCA CGTCGTTGTT CTCCACGCTA TGGACCGTGC TGCGCAAGGA ATTGCGCGAC
ATCTCACGCG ACCGCCGCAC CCTGGCATTG GCGTTGCTGC TATCGCCGCT GCTCTACCCG
ATTCTGATTC TGGGCATTGG CGCCTTGAGC GAGAGCCGCG TGCGTACGCA GATCGACAAG
CCGCTCGACA TTCCCACGCT CGGTCGCAGC AACGCGCCGA ATCTGGTGCG TTTTCTGGCC
GCGCAAGGGC TCAACGCTGT GGATGCGCCA GCTGATCTGA CGGCGGAGAT TCGCAACCAG
GATGTGGATG TGGCACTGCG CATCAGCGAC AGTTATGCAG AGGATTGGCG CGAAGGCCGG
CCGGCACTGG TGGAGATCAT CAAGGACAGC ACGCGCCGCG AAGCCGATGT GCCGAGCATG
CGCCTGCAGG CCGCGCTCAG CGGTTACAGC CAACAGGTGG GGGCATTGCG TTTGCTGGCG
CGCGGGATCG ATGCGCAAGT CTCCAGGCCC CTGGAAGTCG CCGCGCAGGA CCTCGCCACT
GCCGAAGCCA AACGCGGCCA GATGATGGCG ATGCTGCTAC CGGTGTTGCT GGTGATCACC
TCGTTTCTGG GGGGCGCGTC GTTGATTCTG GATGCCACTG CCGGCGAGCG CGAACGCCAA
TCGCTGGAGC CGTTGCTGGC CACGCCCGCG CCACGCAGCG CCATTGTCAG CGGCAAGATC
GCTGCGGCCT GCGTGATCGG CATGGTGTCG TTGTTGCTCA CCTTGCTGGC ATTCAAGCTG
AGCGCGCAGC TGTCCACATC CAACCTGGGC CGACAGCTCA ATGTCGGCTT CGTGCCGATG
CTGCAGATGC TCTTCATCCT GGTGCCGATG CTGTTCGTCG GCACCTCGCT GCTGACCTAT
CTGGCCGCCG CCGCCAGGAG CATGAAGGAA GCGCAGGCGC ACATGACCTG GTTGCTGCTG
CTGCCGATGC TGCCGGGCTA TGCCTTGATG GCGTATCCGC TGAAGACGCA GCTGTGGCAT
TTTGCGGTGC CGTTTCTGGC GCAGAACCAG ATGCTGTTGA AGGTGATCCG CCACGAGACC
ATCAACGTGC AGACCTGGGC GGTGTATCTG CTGGCCGGTT TCGGTGTGGC GGCATTGCTG
TGGTATGCCG CAGTGCGCCG CTATCACCAG GAGCGTCTGG CGATTTCGGG TTGA
|
|---|
| Protein sequence | MSTTSLFSTL WTVLRKELRD ISRDRRTLAL ALLLSPLLYP ILILGIGALS ESRVRTQIDK
PLDIPTLGRS NAPNLVRFLA AQGLNAVDAP ADLTAEIRNQ DVDVALRISD SYAEDWREGR
PALVEIIKDS TRREADVPSM RLQAALSGYS QQVGALRLLA RGIDAQVSRP LEVAAQDLAT
AEAKRGQMMA MLLPVLLVIT SFLGGASLIL DATAGERERQ SLEPLLATPA PRSAIVSGKI
AAACVIGMVS LLLTLLAFKL SAQLSTSNLG RQLNVGFVPM LQMLFILVPM LFVGTSLLTY
LAAAARSMKE AQAHMTWLLL LPMLPGYALM AYPLKTQLWH FAVPFLAQNQ MLLKVIRHET
INVQTWAVYL LAGFGVAALL WYAAVRRYHQ ERLAISG
|
|---|
| |