| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02675 |
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| Symbol | gspE |
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| ID | 6307957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 4564730 |
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| End bp | 4566457 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642641686 |
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| Product | general secretory pathway protein E |
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| Protein accession | YP_001915523 |
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| Protein GI | 188578594 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGCGG TTGCCGTCGA TCCTATCGAG CATCGAAATG CGGAAATGCG CATCGTCGAT
GCGCTGCTTG AACGCCGTCG TCTGAAAGAC ACCGATCTGC TGCGGGCGCG CCAATTGCAG
ACCGAATCCG GCATGGGCTT GCTCACCTTG CTCGGCCGCC TGGGTCTGGT GTCCGAACGC
GATCATGCAG AAACGTGCGC CGAGGTGCTC GGCCTGCCGT TGGTGGATGT ACGCCAGCTT
GGCGACACCC CGCCAGAAAT GCTGTCTGAA GTGCAGAGTC TGTCGCTGCG CTTTCTCAAA
CAATTTCATC TCTGCCCGGT TGGCGAACGC GCTGGCCGGC TGGAGCTGTG GATCGCCGAT
CCCTACGACG ATTACGCCAT CGATGCAGTG CGTCTTGCCA CGGGCTGCAC GCTGCTGTTG
CAGGTTGGCT TGCGCTCGGA AATCGACGAT CTGATCGAGC GCTGGTACGG CCAGGGCCGT
AGTGCGATGG GCACCATCGT CGAAACCGCC GATGGCGATG CCAACAGCAG CGACGACATC
GAAGCGCTGC GCGATCTGGC CTCCGAAGCC CCAGTGATCC GGCTGGTGAA TCTGGTGATC
CAGCACGCGG TGGAACTGCG TGCCTCCGAC ATCCATATCG AGCCGTTCGA AAGCCGGCTC
AAGGTGCGTT ACCGCGTCGA CGGCGTGCTG GTGGAAGGCG AAAGCCCGCC GGCCAAGCTC
ACTGCCGCAG TGATCAGCCG CATCAAGATC ATGGCCAAGC TCAATATCGC CGAACGCCGC
CTGCCGCAGG ACGGCCGCAT CATGTTGCGC GTGCAGGGCA AGGAGCTGGA TCTGCGCGTC
AGCACCGTGC CCACCGCGCA TGGCGAAAGC GTGGTGATGC GTCTGCTCGA TCGCGAAACG
GTGGTGTTCG ACTTCTACAA GCTCGGCTTT ACCGAAGCGT TTTTGCCGCA GTTCCGCAAG
GTGCTGGAAC AACCGCACGG CATCATGCTG GTCACCGGTC CCACCGGTTC GGGCAAGACT
ACCACGCTGT ACACCGCGTT GAGCCAGCTC AACACCTCCG ACGTAAAAAT CATCACCGTC
GAAGACCCGG TGGAATACCA GATCGAAGGC ATCAACCAGA TCCAGGCCAA GCCGCAGATC
GGGCTGGATT TCGCCAACGC CCTACGCAGC ATCGTGCGTC AGGATCCGGA CATCATCATG
ATCGGCGAAA TGCGCGATCT GGAAACCGCG CGCATCGCGA TCCAGTCCGC GCTCACCGGC
CATTTGGTGC TGTCCACGCT GCACACCAAT AACGCAGCCG GCGGCATCAC CCGTCTGCTC
GACATGGGCG TGGAGGATTA CCTGCTCACC TCCACCATTA ACGGCATCCT GGCGCAACGG
CTGGTGCGCA AACTCGATCT GGCCAATGCC GAACGCTACG CCGCATCGCC CGAAGAGATC
GAACGCTTCA ATCTGCGCCG TCTGCAGCCC GAGGGCGAGA TTTTCCTGTA TCGGCCGCGT
CCCTCGGCCA CCGCACCCAC CGGTTATCTG GGCCGCACCA CCATCGTCGA ATTCCTGGTG
ATGAACGACG AATTGCGCCG CGCGGTGATG CGCCGCGCCG GCATGGGCGA GATCGAACAA
CTGGCCCGCC AGGCCGGCAT GCGCACCATG TACGAGGATG GCTTGTCCAA GGCCTTGCGT
GGCGAAACCA CCATCGAAGA AGTCCTGCGC GTCACGGAGG ATGCGTGA
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| Protein sequence | MNAVAVDPIE HRNAEMRIVD ALLERRRLKD TDLLRARQLQ TESGMGLLTL LGRLGLVSER
DHAETCAEVL GLPLVDVRQL GDTPPEMLSE VQSLSLRFLK QFHLCPVGER AGRLELWIAD
PYDDYAIDAV RLATGCTLLL QVGLRSEIDD LIERWYGQGR SAMGTIVETA DGDANSSDDI
EALRDLASEA PVIRLVNLVI QHAVELRASD IHIEPFESRL KVRYRVDGVL VEGESPPAKL
TAAVISRIKI MAKLNIAERR LPQDGRIMLR VQGKELDLRV STVPTAHGES VVMRLLDRET
VVFDFYKLGF TEAFLPQFRK VLEQPHGIML VTGPTGSGKT TTLYTALSQL NTSDVKIITV
EDPVEYQIEG INQIQAKPQI GLDFANALRS IVRQDPDIIM IGEMRDLETA RIAIQSALTG
HLVLSTLHTN NAAGGITRLL DMGVEDYLLT STINGILAQR LVRKLDLANA ERYAASPEEI
ERFNLRRLQP EGEIFLYRPR PSATAPTGYL GRTTIVEFLV MNDELRRAVM RRAGMGEIEQ
LARQAGMRTM YEDGLSKALR GETTIEEVLR VTEDA
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