Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_02554 |
Symbol | |
ID | 6307800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 4407677 |
End bp | 4408165 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642641534 |
Product | transposase |
Protein accession | YP_001915372 |
Protein GI | 188578443 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0840457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAAGGCT TCATCTGCGT TTTCGGTGTG CTGGAATTGC CAGTGTTCGT TACTCCACGT TCTGGTTTCT GGCAGTTTTC GCCCATGCGG ACACGCCGTC CTGCTGCCGA GCAATTGCAT GCCGATGAGC TGTTTCGTTC GCGTCTGGAG AACCAGATCG ACTTGCGCCA TCCACTGGTC CAGCTGAGCC ATCGGCTGCC GTGGAGTGCG TTGGAGCAGG CGCTGTCGCC GCGGTTGCCG GCCACCACCG GCACAGGCGG TCGGCCCGCA TTGCCGGTGC GCTTGATCGC CGGGCTGCTT TACCTCAAGC ACGCCTACGA CCTGTCCGAC GAGGCGGTCT GCGAGCGCTG GCTGGAAAAT CCGTACTGGC AGTTTTTCAC CGGCGAGGTG GTGTTCCAGA CCTGCTTGCC GTGCGATCCC AGCTCCCTGA CCCGTTGGCG ACAGCGCCTG GGCGAAGCCG GTCTGGAAGC GCTGTTCCCC CAAGTTTGA
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Protein sequence | MQGFICVFGV LELPVFVTPR SGFWQFSPMR TRRPAAEQLH ADELFRSRLE NQIDLRHPLV QLSHRLPWSA LEQALSPRLP ATTGTGGRPA LPVRLIAGLL YLKHAYDLSD EAVCERWLEN PYWQFFTGEV VFQTCLPCDP SSLTRWRQRL GEAGLEALFP QV
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