| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02406 |
|---|
| Symbol | |
|---|
| ID | 6307643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 4253037 |
|---|
| End bp | 4254422 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642641380 |
|---|
| Product | two-component system sensor protein |
|---|
| Protein accession | YP_001915228 |
|---|
| Protein GI | 188578299 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAGC CGCTGACGGT GGCACCGTCG ATCCGGCGCA CCTTGCTGCT GTATCTAGGC
AGCTTGTCGC TGCTGGGTGC GGTGGTGCTG TTCTTTGCCG CGCGCAACTA CGGCGAGCGC
GCGGCCAATC GGTCCTACGA TCATCTGCTG GTGTCCTCGG CCTTGTCGAT CATCGACAGC
GTGGCGTTGG TCGGCGGCGA TTGGCAGGTG GATTTGCCAT ATGCATCGCT GGATCTGCTG
GGCATGGCAC CGGAAGACCG CGTGTTCTAT CGCGTGTTCG ATGCGCAGGG CCGCACCATC
ACCGGCGAAG ACACGCTGCC GCTGCCGCCA GGCTCGCCGC GCGACGAGCG GCCGCTGTTG
TTCGATGCGC AATACAGCGG CGAGCCGGTG CGCTTTGCGG TGGTGATGCA TCGGGTGGCA
TCGGCATCGG AGCAAGACGA GGTGCGCGTG CAGGTGGGCC AGACCCGCCG CGCACGCGAT
GCCGTGGCGC GCGACGTGGT GCTCAACGCG TTAGTGGCGA TCGGGGTACT GTCGCTGCTG
GCGCTGGCCC TGGTATGGCT GGGTGTGTAC CGCGCGTTGC GGCCATTGCA GCGCATCGAA
CGCGATCTGT CGCGGCGCGA ACCCTCCGAC CTCAAACCGC TTAATGTGCC GGCACCGCAG
GAAATGCAGT TGATGGTGAC TGCGCTCAAC AGCTTCATGG CGCGGCTATC GTCCAGTAAT
GAAACCCTGC GCGCGTTCAT GGCCGAGGCC GCGCACCAGA TGCGTACGCC CTTGGCGGCC
CTGCGTGCGC AGGCGCAGCT GGCGATGGAC GATGACGACC CGCGCGAGAT GCAACGCAGC
CTGGTTGCGA TCGAGCGCAA CGCCAGCCAC ATGAGCCGGC TGCTCAATCA GTTGCTCAGC
GATGCCAGCG TGACCCATCG CTCCAACCTG CAGCGCTTTG CCACCGTGGA TCTGGCAGAA
CTACTGCATC AGGCCTTGCG CGAAGCACTG CCGCGGAGCG AAGGCGCACC GCGCGTGCAC
CTGGCGATCG ACCCGCAGCC GGCGCTGCTA CGTGGCGATG CCTTGCTGCT GCGCGAAGCG
CTGAAAAACC TGATCGACAA TGCATGCAAA TACGGCGCCG TTGCACCGCT ACAAGTGGCG
CTCACCAGCG ACGGCAACCA TCACGTGCTG ACCATCGCCG ATCACGGCCC AGGGATTCCG
GCTGCCGAAG CCGAGCGCGT GTTCGAGCGT TTCGTCCGTG GGCAGGATGC GCCGGCCGGC
GGTGCCGGAC TGGGGCTGGC CATCGTCAAA CGTGTGGTGG AAGCACATGG CGGGCGTATC
GATCTGGCCA ACCGTATCGG CGGCGGCTTG ATCGCGTCGC TGCATTTTCC TGGAGGACCT
GCGTGA
|
|---|
| Protein sequence | MAEPLTVAPS IRRTLLLYLG SLSLLGAVVL FFAARNYGER AANRSYDHLL VSSALSIIDS
VALVGGDWQV DLPYASLDLL GMAPEDRVFY RVFDAQGRTI TGEDTLPLPP GSPRDERPLL
FDAQYSGEPV RFAVVMHRVA SASEQDEVRV QVGQTRRARD AVARDVVLNA LVAIGVLSLL
ALALVWLGVY RALRPLQRIE RDLSRREPSD LKPLNVPAPQ EMQLMVTALN SFMARLSSSN
ETLRAFMAEA AHQMRTPLAA LRAQAQLAMD DDDPREMQRS LVAIERNASH MSRLLNQLLS
DASVTHRSNL QRFATVDLAE LLHQALREAL PRSEGAPRVH LAIDPQPALL RGDALLLREA
LKNLIDNACK YGAVAPLQVA LTSDGNHHVL TIADHGPGIP AAEAERVFER FVRGQDAPAG
GAGLGLAIVK RVVEAHGGRI DLANRIGGGL IASLHFPGGP A
|
|---|
| |