| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02186 |
|---|
| Symbol | |
|---|
| ID | 6307493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 4093075 |
|---|
| End bp | 4094115 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642641232 |
|---|
| Product | voltage-gated ion channel superfamily protein |
|---|
| Protein accession | YP_001915080 |
|---|
| Protein GI | 188578151 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCCGCG TCAGCTGGGG CATGGTGACG CTGGCACTGC TTGCGCACAT GGGCTTGAGC
TGGGTGTTGC TGCTGTGGGC CGGCGAGCAG AAGCGCGTTG GCCTGGACGC GTTTGCGTAC
TACTACATGA CCACCGCCAC CACCATCGGC GACGGCGATC TGTCGCCGGG CTCGGTGGCC
GGGCGCTCTC TCGTTGCGTT CGTGTTGATG TCGGGTGCGA TGGCGTTGTT CACCACGATG
CTGGCCAAGA CCAGCGGCGT GCGCATCACT GTCTGGAGGC GCCACCACAT GGGCAAGATG
GCCTATGCCG ATCTGCGCGG GCACACCATT CTGATCGGCT GGCAGGGCGC GGCCTCCACG
CGCTTGCTGG AGTTGCTGCT CTCCGATACC GCCACCGATG ACGAAGGCGT AGTGCTGATC
GCCGAGGGCG TGGCGGGAAA CCCGCTGCCC GACCACATGC GCTTCATCGC TGCCGAGTCG
TACACGCACA CCGAGGTGTA CCTGCGCGCC GGCATTACCG GCGCCGCGCG TGTCATCGTC
AATCTGCCCT CCGACGACCA GACCCTGGCG GCGGTGTTCG CGTTGATGGC GCATGCACCG
GCCGCACACA TCGTGGCGCA CTTCGATTCG GCCAGCGCGG CGCGCTTGGT CAACTGCCAT
TACCCGGCCA TTGAGTGCGC GCGCCCGATG ACCGCCGAGA TCCTGGCCCG CGCGGCGCAG
GATCCGGGCA GCGCGGCGAT CACCGCCGAG CTGCTATCGG TAGACGATGG CCCCACCCAG
TTCAGTCGTG CCGCGCCTGC GAATGCGCAA CCACTGGATG ACAGCCGGCT TGCGGCCGAT
TTCAACCAAC GCGGCACATT GTTGCTGGGC CTGCGCGCGC CCGATGGCGC ATTGCGCTTG
AACCCGCCAG CACGCATCGC TGTCGCCGCC GGTGCCATGC TGTCTTACCT GGCCGAGCAG
CGCGTGCCGG CGCACGCCAT CGCGTGGCAG GCCGTGCGCA GCGAGGCGTC CCCCATGTCC
CCATCGCTAC AAGGTGTATG A
|
|---|
| Protein sequence | MRRVSWGMVT LALLAHMGLS WVLLLWAGEQ KRVGLDAFAY YYMTTATTIG DGDLSPGSVA
GRSLVAFVLM SGAMALFTTM LAKTSGVRIT VWRRHHMGKM AYADLRGHTI LIGWQGAAST
RLLELLLSDT ATDDEGVVLI AEGVAGNPLP DHMRFIAAES YTHTEVYLRA GITGAARVIV
NLPSDDQTLA AVFALMAHAP AAHIVAHFDS ASAARLVNCH YPAIECARPM TAEILARAAQ
DPGSAAITAE LLSVDDGPTQ FSRAAPANAQ PLDDSRLAAD FNQRGTLLLG LRAPDGALRL
NPPARIAVAA GAMLSYLAEQ RVPAHAIAWQ AVRSEASPMS PSLQGV
|
|---|
| |