Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_02041 |
Symbol | |
ID | 6307276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 3870285 |
End bp | 3871073 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642641020 |
Product | hypothetical protein |
Protein accession | YP_001914868 |
Protein GI | 188577939 |
COG category | [S] Function unknown |
COG ID | [COG3455] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.928421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCCGC TGCCCCCCAC CCCCGGCCCG ATGCCGTCGC TGACCGCGCA GGCACCGCAC GGCCTGCCGA GCGCCCATAC CTCCACGCCG CAGAGCCTGC TCGACCTGAT GGCCGACGGC TTCTACCTGT TGCTGCTGCT CAAGCGCACG CAGATGCCCA GCGACACCGA ATCCTTCGTG CAGTCGGTGC AGACATTCCT CGATGGCGTG GAACGCGGCG CAGTCAAGCT CGGCATCGCC TCCGAGGACA TCTACGCGGC CAAATACGCG TTCTGCGCGG CAGTAGACGA AGCGATCCTG TCGCAGCCCT CGGCACTGCA CGAAACCTGG GAACGCAATC CGCTGCAGCT GCGCCTGTTC GGCGAACACC TGGCCGGCGA GCATTTCTTC GATCGCCTGG AAGAGCTGCG CCGCCAGGGC GCCGTGCGCC TGCCCTCGCT GGAGATCTAC CACTATTGCC TGCTGCTTGG CTTCGAAGGC AAGTATCGGC TGGAAGGGCC GGAAAAGCTC GGCTACCTGA CCGCGCGGCT GGGCGACGAG ATCATCTATT TCAAGGGCAA GCGCAGCGGT TTCGCACCGC ATTGGCCGCC GCCGGACAAC GTGCGCCATG CCTTGCGCCG TGTGGTGCCG CTGTGGCTGC CGGCCGCGCT GGTGACCGGC TTCGGCCTGC TCGGCTTCTT CGGTCTGCGC CTGTCTCTGG ACCACCAGAC CGAGCGGCGC ATGGCCGCCT ACAACCAGGT GGTGCAGATG CCGCAACGCA CCGCGCACAT TACGATCACC CTGCCGTGA
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Protein sequence | MNPLPPTPGP MPSLTAQAPH GLPSAHTSTP QSLLDLMADG FYLLLLLKRT QMPSDTESFV QSVQTFLDGV ERGAVKLGIA SEDIYAAKYA FCAAVDEAIL SQPSALHETW ERNPLQLRLF GEHLAGEHFF DRLEELRRQG AVRLPSLEIY HYCLLLGFEG KYRLEGPEKL GYLTARLGDE IIYFKGKRSG FAPHWPPPDN VRHALRRVVP LWLPAALVTG FGLLGFFGLR LSLDHQTERR MAAYNQVVQM PQRTAHITIT LP
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