Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01932 |
Symbol | |
ID | 6307379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 3983981 |
End bp | 3986122 |
Gene Length | 2142 bp |
Protein Length | 713 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642641120 |
Product | TonB-dependent outer membrane Receptor |
Protein accession | YP_001914968 |
Protein GI | 188578039 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4772] Outer membrane receptor for Fe3+-dicitrate |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGACGT TCCGTTTCCA CGCCCTGCCC ATCGCCATCG CAGCAATCAC GCTGGCCCTG CCGCAGCCGG CGCGCGCAGC CGACACGCCG ACAACCGATG CGGTTGATGC CACTGATGGC GGCACGCCGA TCCGTGCGCT GGACGCGATC CAGGTGCAAG GCACCCTGCT CGGTCGCTCC AAACCCGACG ATGTACAGGG TTACGCCGGC AGCCGCCAGG TGATCGACCG CGAGCAGCTG CGCAATGGCG GCAATCGTTC GCTGGACGAT GCATTGCAGC GTGTGCCCGG CATCAAGATC TTCGACGAAA CCGGCAACGG CGCCTTGCCG CAGCTGATGC TGCGCGGCCT GTACGAAAGC CGCAGCGGCC GCGCGCAGGT GCTGGAGGAC GGCATTGCGC TGGCTCTGGC GCCGTACGGG CAAACCAGCC TGTCGTTGTT CCCGGTGGGG TTGCATCAGA TCGACCGCAT CGACATCGTG CGCGGCGGCG CGGCGGTGCA GTACGGGCCG AACAACGTGG GCGGGGTGAT CGATCTGGTC AGCAAGGAGA TCCCCAGCGC GTGGAGCACC ACGCTGGCGC ACAAGGTCAC CGCCGGCGGC CAGGGGCAGT TTCTGCAGGA CAGTGCGCTC AGCAGCGGCG GATACCTCAC CGAAAATTTG GGAATGCAGG TCGATGCCAA TCGCACCTAT GGCGAGTACT GGCGCGCACA TAGCGACACC GACATCAGCA ATCTGCGTGT GCGTGCCGAG TGGTGGCTGG ACGACACCAC GTTGCTGAAA GCCAGCGTGC AGCGTTATCT GGTCGACATG GATCTGGCCG GCGCCCTCAG TCCGGACGAT TACCGACGCG ATCCGCGCCA GTCCACGCGT CCGCTGGACA GCTTCAACGG CCGCACCACA CGTGCGTCGC TGAGTTACGC GCAGCTGCTG GGCGATTGGG GGCCGATGAA AGACGTGCGC CTGGATTGGA CCAACTTCAG TGCACGCAGC AGTCGTAATT TCATCGTGGG CATGCGTCAG GCCTCGACCG AAACCTGGCG CTCGGACCTG CCGCCGCAAC TGCGCCAGAC CGCGCCGCGC GATTTCCGCG TGGTCGGCAG CGAGCCGCGT CTGAGCTGGA CCATGGGCGA TGCCGGCGGG GTGCGCCAGC AGTGGACCGC CGGTGCGCGC GCGGTGCGCG AAGACATCGA TTTTCTGGTC GGCAACCTGC GCTTGCGCGA TGGGCTGTTC ACCACTGTGC GCGATTGGCA GTTCGAAGAC CACGCGTTGG CCGCGTACGT CAGCAACGCC ATTACCCTGC CGGATGAGCG CGTAACGATT ACGCCGGGCC TGCGCTACGA GCGTCTGGAT TCGCGTTATT TCAATCGCGC CACCGGCGTC AGCACGCTCA ATCGAACACG CGATGTGTTG CCCGGTCTGA CACTGGGCTT CCAGGCCAAC GAACAATGGT TCTTCTATGC CGACGGCCAG CGTTCGATGC GTGCGCCGCA GGTCACCCAG ATCATCTTCG GCAACAACCT GGATGCCGAA CTGGCATGGA ATTACGAAGC CGGCACACGC TATCAGCCCA ACGAGCGCAC GCGCATCCAG CTGGGCGGAT ACCTCATCGA TTTCGATCAG CAGATCCAAC TGGATAACAC CACGCGCGTG TTCCGCAATC TCGGCAAGAC CCGCCATCAA GGTGGCGAGC TGGAACTGCA ATGGAGCCCG GAGCAACTGC GTGCGCTCAC CCTCAACGCG AGCTATGCAT ATCTGGATGC CAGCCAGGAA TCGGGCGCAT TCCGTGGCTT CCGGGTGCCT TACACCTCGC GTAACCAGAT CACCTTGGGC GGCAGCTACG CACTCGGTCA CACGACTGTC GCGCTTTCCG GCTATTCCTT CAGCAAGGCC TTCAGCGATG CAGCCAACAC CGTGCAGGAG AATGCCATCG CCTCAGTGGG CCAGCTGCCG GCCTACATGG TGTGGAACAC GCAGGTGAGC CATACCCTGT TCGAACGCGA TGGACAAAAA TTCAGCGCAT CATTGGCGAT CAATAATCTG TTCGACCGGC AATACTGGTT CCGCGGCGTC GATACCAGCC CGTGGGGGCG TCAGGCCGCA CCGGCCCGGA CCGTCACTGC CGGGCTGGAA TACACGTTCT GA
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Protein sequence | MSTFRFHALP IAIAAITLAL PQPARAADTP TTDAVDATDG GTPIRALDAI QVQGTLLGRS KPDDVQGYAG SRQVIDREQL RNGGNRSLDD ALQRVPGIKI FDETGNGALP QLMLRGLYES RSGRAQVLED GIALALAPYG QTSLSLFPVG LHQIDRIDIV RGGAAVQYGP NNVGGVIDLV SKEIPSAWST TLAHKVTAGG QGQFLQDSAL SSGGYLTENL GMQVDANRTY GEYWRAHSDT DISNLRVRAE WWLDDTTLLK ASVQRYLVDM DLAGALSPDD YRRDPRQSTR PLDSFNGRTT RASLSYAQLL GDWGPMKDVR LDWTNFSARS SRNFIVGMRQ ASTETWRSDL PPQLRQTAPR DFRVVGSEPR LSWTMGDAGG VRQQWTAGAR AVREDIDFLV GNLRLRDGLF TTVRDWQFED HALAAYVSNA ITLPDERVTI TPGLRYERLD SRYFNRATGV STLNRTRDVL PGLTLGFQAN EQWFFYADGQ RSMRAPQVTQ IIFGNNLDAE LAWNYEAGTR YQPNERTRIQ LGGYLIDFDQ QIQLDNTTRV FRNLGKTRHQ GGELELQWSP EQLRALTLNA SYAYLDASQE SGAFRGFRVP YTSRNQITLG GSYALGHTTV ALSGYSFSKA FSDAANTVQE NAIASVGQLP AYMVWNTQVS HTLFERDGQK FSASLAINNL FDRQYWFRGV DTSPWGRQAA PARTVTAGLE YTF
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