Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01929 |
Symbol | |
ID | 6307382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 3989380 |
End bp | 3990588 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642641123 |
Product | transport protein |
Protein accession | YP_001914971 |
Protein GI | 188578042 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACGCA TTCTGGGCCC GGTGCTGGCC GCGCATTATC TGGCGGCATT CACCGCGCTA GGCATGCCGC TGTTCCTGCC GCAGGTGTTG GCCGAACTTG CACCATCGAC CGCGGTGGGC TGGAGCGGCG TGCTGTATGT GCTACCGACG CTCTGCACCG CGTTGACCGC AAGCGCCTGG GGACGCCTGG CCGACCGCTA TGGACGCAAG CGCTCGCTGC TGCGCGCACA ACTGGGGTTG GCGCTGGGCT TTGCGATTGC CGGCTTCGCG CCGTCGCTGA CCTGGCTGGT GGTCGGGCTG GTCGTGCAAG GCACCTGCGG CGGCTCGCTG GCGGCGGCCA ATGCATATCT GGCCAGCCAG CCGCAGGCCG GCCCGTTGGC GCGTGCGTTG GACTGGACGC AGTACTCGGC GCGGCTGGCC ATGGTGAGCG CACCGGCGTT ACTCGGCCTT GCCTTGGCGC TGGGCCCGGT GCAATCGCTG TATCGCGCGC TGGCAGTGTT GCCGTTGATT GCGTTTGCGT TGACCTGGCG GTTGCCGGCC GATCAGCCTG CTGGGCGAAC ACAATCCGCA GGCAAACCTT CGACCTCTTC GACGCACGCA GCTTCATCGT CGACAGCAGC AACAACAGCA ACAGCGGCAA TCATCACCCC CCTGTGGCCT GCCTTACTAC TCGCACAGTT TTTGTTCTGC TTTGCGATGG TGGTGACGTT TCCGTATTTC ATTCCGTACG CGCTTGCGCG CGGCGCCGGC CACGATGCGC TTGCCGGTCT GCTCTACAGC CTGCCGCATC TGGTCTATCT GGTGGTGCTG CCCTGGTGGC GACGCGGCGA TAGCGAGGTG TGGCTGGTGC CGGGCCTGGC GTTGTTCGCA ATGGCCTGCG TGTGGCAGGC GCTGTTGCAC GATGCCGTCA CATTGGCGGC AGCGCGGCTG TTGTTTGGCT TCGGCATGTT GTTCGGGCTG CGTGGGCTCA ACCGCAGCTT GGCGACCGTT GCCAGCGGGA ACGGTGCCGG GCGCCTGTTC GGTCGCTTCG ATGCCTGTGG CAAATGGGCT GGTGTGTTCG CCGGTGCCGC TGCCGGTGCT TTGGCGCAGG CGTCCGGTCC CGCTACCCCT TTCCTGGCTG CCGCGCTGGC TGCGGCCGCT GCTGCGCTCA CCGTTCTGGT GCGCTTCCCT TCGAGGAGAG TTGCCGATGT CGCCACACAC GATGCATGA
|
Protein sequence | MKRILGPVLA AHYLAAFTAL GMPLFLPQVL AELAPSTAVG WSGVLYVLPT LCTALTASAW GRLADRYGRK RSLLRAQLGL ALGFAIAGFA PSLTWLVVGL VVQGTCGGSL AAANAYLASQ PQAGPLARAL DWTQYSARLA MVSAPALLGL ALALGPVQSL YRALAVLPLI AFALTWRLPA DQPAGRTQSA GKPSTSSTHA ASSSTAATTA TAAIITPLWP ALLLAQFLFC FAMVVTFPYF IPYALARGAG HDALAGLLYS LPHLVYLVVL PWWRRGDSEV WLVPGLALFA MACVWQALLH DAVTLAAARL LFGFGMLFGL RGLNRSLATV ASGNGAGRLF GRFDACGKWA GVFAGAAAGA LAQASGPATP FLAAALAAAA AALTVLVRFP SRRVADVATH DA
|
| |