| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01773 |
|---|
| Symbol | |
|---|
| ID | 6306543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 3112543 |
|---|
| End bp | 3112890 |
|---|
| Gene Length | 348 bp |
|---|
| Protein Length | 115 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642640297 |
|---|
| Product | endoribonuclease L-PSP family |
|---|
| Protein accession | YP_001914154 |
|---|
| Protein GI | 188577225 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.719379 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCAGC GATTCGATGC GGGTCCGCGG ATGTCCGAAA TGACCGTCCA TGCTGGCGTG
TGCTATCTGG CCGGCCAGAT TGCCGATGAC ACCAGCCAAG ACATCACCGG TCAGACCCGC
CAGGTGCTGG GCGAGATCGA CAAGCTGCTG GCGCTGGCGG CCAGCGACAA GACCAAGATT
CTGCGGGCAG AAATCTTTCT CGCCGACATC GCCGATTTCG ATGGCATGAA CAAGGCCTGG
GACGCGTGGG TGCCGCACGG CTTCACGCCT GCCCGCGCCA CCGTCGAAGC CACGTTGGCG
CGACCGGAGT GGAAGGTGGA AATCGTTGTC ACCGCTGCGG CGGGCTGA
|
|---|
| Protein sequence | MVQRFDAGPR MSEMTVHAGV CYLAGQIADD TSQDITGQTR QVLGEIDKLL ALAASDKTKI
LRAEIFLADI ADFDGMNKAW DAWVPHGFTP ARATVEATLA RPEWKVEIVV TAAAG
|
|---|
| |