Gene PXO_01767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_01767 
Symbol 
ID6306549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand- 
Start bp3119397 
End bp3119999 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content64% 
IMG OID642640303 
Product2'-5' RNA ligase 
Protein accessionYP_001914160 
Protein GI188577231 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.680529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAAC AGTTCCTGTA CCTATCGTCG GCCCAAGCGC AGTTGTCGCT TGGGCTGGGG 
GATGAGAAGA CCACTGAACG CCTGTTTTTT GCGGTGATGG CCGATGCGCC CACGGCCGAG 
CAGGCGGCGC GGATTGCCGA CAGCCTGCTG CAAGGCGGGC ACGCGGAAGG CAAGCCACTT 
GCGCGCGAAC GGCTGCATGT GACCTTGCAT CATTTGGGCG ATTACGCCGG TGGTTTGCCG 
CCATCGTTGG TAAGCCGCGC CACTCAGGCC GCGGCGCGCG TCGCAATGGA TGCGTTCGCA 
GTGGAATTCG ACCGCGTCGG CACCTTCGGT GGCAGGCGCT CGCAACTTCC CTGCGTGTTG 
CGTGGCGAAG AGCAGGTACG TGGGCTCTAC GCGCTGCAAG GCGCATTGGG AACGCAGCTT 
GCGCATGTCG GTATTGCCGG CGATGCGCAG TACACGCCAC ACATGACGCT GCTGTACTGC 
AATCAGGCGG TGCCGCAACG ACGCTGCGAT GCGCTTGCCT GGACGGTGCG CGACTTTGCG 
CTGGTGCGCA GCTTTCTTGG CCAGTCGCGT TATCAGATCG AAGGCCGCTG GTCGCTGCGC 
TGA
 
Protein sequence
MKQQFLYLSS AQAQLSLGLG DEKTTERLFF AVMADAPTAE QAARIADSLL QGGHAEGKPL 
ARERLHVTLH HLGDYAGGLP PSLVSRATQA AARVAMDAFA VEFDRVGTFG GRRSQLPCVL 
RGEEQVRGLY ALQGALGTQL AHVGIAGDAQ YTPHMTLLYC NQAVPQRRCD ALAWTVRDFA 
LVRSFLGQSR YQIEGRWSLR