| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01549 |
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| Symbol | fmdB |
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| ID | 6306764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3364129 |
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| End bp | 3364422 |
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| Gene Length | 294 bp |
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| Protein Length | 97 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642640516 |
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| Product | putative regulatory protein, FmdB family |
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| Protein accession | YP_001914372 |
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| Protein GI | 188577443 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2331] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02605] putative regulatory protein, FmdB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCCATCT ACGGTTTCCA GTGCACCACC TGCGGCCACG CATTCGACCG CCTGCAGAAG
ATGGCCGACC CCGATCCGCA GACCTGCCCG GCCTGCGCCG CGGCGACGAT CAAGCGTCAG
GTCACCGCGC CGTCGTTCCG CCTGTCCGGC AGCGGCTGGT ACGAAACCGA CTTCAAGTCG
GCCGGCGAGA AAAAGAAAAA CCTCACCGAA AGCAGCAGCG CCGGTGGCGA TGCCAAACCA
GCCGCGGCAG CGGAGAGCAA GCCGGCGGCC AAGCCAGCGT CCGATCCGGC ATAA
|
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| Protein sequence | MPIYGFQCTT CGHAFDRLQK MADPDPQTCP ACAAATIKRQ VTAPSFRLSG SGWYETDFKS
AGEKKKNLTE SSSAGGDAKP AAAAESKPAA KPASDPA
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