| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01433 |
|---|
| Symbol | |
|---|
| ID | 6306877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 3476887 |
|---|
| End bp | 3477615 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642640625 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_001914480 |
|---|
| Protein GI | 188577551 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.738294 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCTA CCATGACCCT GATGGACCTC AACCTGCCCG CTCTGGAAAT GCAGACGCTG
TTCGACGCAC TGCCGGATGT GGTGTTCTTC ATCAAGGACA GTGAGGGCCG CTACACCCAC
TGCAACCTGA CCCTCGTGCG CCGGCTGGGA AGCAAGCTAC GCAGCGAGAT CATCGGTCAT
TCGCCGCTGG AGGTCTTCCC CTTGCCGCTG GGCGGCAGCT ACATGATGCA AGACCGCCGC
GTGCTATGCG GCGAGCTCAT CGATAACCAG CTCGAAGTGC ATCTGTATCC CAACCGCCTG
CCGGGTTGGT GCCTGACCTT CAAACGCCCG TTGTGCGAGG CCAATGAGGT GATCGGCGTG
GTCGGCATCT CGCGCGATCT GGGCCAGCCC GACAGCCGTC ACTCCGCTTA CGAACGCTTG
AGCCAGGTGA TGGAACACAT GCAGGCCAAC TTCGGCGACA ACCTGCGCGT GCAAAGCCTG
GCCGCCCTGG CGGGGCTATC GGTGGCGCAG TTGGAGCGCC ACTTCCGCCG CGTGTTTCAG
GTCACCCCGC AACAACTGTT GACCAAGTTG CGTATTGAAT CGGCGATGCG ACTGCTGTAC
GGCGACGACA GCATCGCCAG CATTGGGCAA CAGTGCGGCT TTGCCGACCA GAGCGCCTTT
GCGCGTCAGT TCAAGGCCAC GGTCGGCATG ACGCCACGCG ATTACCGTGC ACTGAAAGGT
CAGCTATAG
|
|---|
| Protein sequence | MTATMTLMDL NLPALEMQTL FDALPDVVFF IKDSEGRYTH CNLTLVRRLG SKLRSEIIGH
SPLEVFPLPL GGSYMMQDRR VLCGELIDNQ LEVHLYPNRL PGWCLTFKRP LCEANEVIGV
VGISRDLGQP DSRHSAYERL SQVMEHMQAN FGDNLRVQSL AALAGLSVAQ LERHFRRVFQ
VTPQQLLTKL RIESAMRLLY GDDSIASIGQ QCGFADQSAF ARQFKATVGM TPRDYRALKG
QL
|
|---|
| |