| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00883 |
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| Symbol | |
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| ID | 6305955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 2483573 |
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| End bp | 2486707 |
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| Gene Length | 3135 bp |
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| Protein Length | 1044 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642639719 |
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| Product | discoidin domain protein |
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| Protein accession | YP_001913579 |
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| Protein GI | 188576650 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0432744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCA TTGCCGCCGC GGGCGCGGCG CAGGCGCAGG AGCGCGTGCT CGACGGCTTC
AACGACATCG GCGCCTGGCG CCTGGTGGTG TCCAATCAGG TCAGCGGTTC GCTGCGCCCG
GTGGCCACTC CCTCCGGCGG GCATGCGCTG TGTCTGGATT ACAACTTCAA CGGCGTGTCC
GGCTATGTCG GCATCCGCCG CAAATTGCCC ATCGAGTACC CGGACAATTA CCGGCTTGGT
CTTGTGTTGC GCGGCGACTC GCCGTCCAAC GATCTGCAGC TCAAGCTGAT CGATGCCAGC
GGCGATAACG TGTGGTGGGT CAACCGGCCG GGTTTTGCCT TCCCAAAGAA CTGGACCACG
GTCAGCGACC GCAAGCGCAA TATCGAAAAA GCCTGGGGAC CGGGCCAGGA CAAGCAACTG
CGCCGCAGCG CAGATGTGGA ATTCACCATC TACAACAAGG TCGGCGGTAA GGGCACAGTG
TGCTTGGACC GCCTGACGCT CACGCCGCTG CCGCCGGAAG ACACCTCGCC GCTGCAGGCC
AAGGCCATTA CCGACACCGC GCCTGCGCTG GAACAGCGCC TGGCCGACGG CAAGCCGGAC
ACGTTCTGGC TCAGCGGCGC GGTCAAGCAG CAGACGGTCA CGTTGGATCT GGGCAAGGTG
CGCGAATTCG GCGGCGCCAT CGTGCAGTGG GTGCCGGGTC TGCAGGCTTC GCAATACGTG
GTGCGCTCTT CCAGCGACGG ACGTAGCTGG CGCGATCTGC GCACCGTGAC TGCCGGCGCC
GGCGGCACCG ATTGGCTGGC GCTCCCCGAT ACCGAAGCGC GCTATCTGCG TTTCGATCTC
AAGGACGGCC CCAACTGGCG CTACGGCATC AAGGAAGTGC AGTTGCAGCC GCTGGCATTC
GCCGCAACGC CGAATGACTT CATCAAGTCG CTGGCTGCAC AACTGCCGCG TGGCAGTTAT
CCGCGCGGCT TCTCCGGCGA GCAGCCGTAC TGGACCATCC TGGGTCTGGA CGGTGGTACC
GAACAGGGCT TGATCGGCGA AGACGGTGCG GTGGAGGTGG GCAAGGGCGG TTTCAGCATC
GAGCCGTTCG TGGTCACCGG CGGCAAGGTG CTGCACTGGT CCGATGTCAG CAGCGAGCAG
AGCCTGCAGG ACGACTATCT GCCGATTCCC AGTGTCGATT GGCACCACGA CCTGATGAAT
CTGCGCGTCA CCGCGTTCGT GCAGGGCACC CCCGATCAGG CGCAACTGGT CGCGCGTTAC
CAACTGCACA ACACCGGCAA GGAGGCGCGC GATTTCACCC TGGCGCTGGC CGTGCGCCCG
TTCCAGGTCA ATCCGCCGGC GCAGTTCCTC AACACCCTGG GGGGCGTCAG CCGGATCGAC
CAACTCGCCG TAGATGGCGG CCAGGTCAGC GTCAATGGCA AGCCGCGGGT GTTCGCTGCA
CAGCGACCGG ATGCCGGCTT CGCCAGTGCT TTCGACAGCG GCATGGATGT CAGCCATCTC
ACTGCGGCCA CGCCGCCGAC GGTCACCCAG GTCAAGGACG AAACCGGCCT GGCCTCGGGG
GTGTTGCTGT ATCGCTGGAA GCTGGAGCCC GGACAACGCC GTGAGGTGGC GCTGGTCATT
CCGCAAACCG GTGTCGCGCA GCTGCCGGCT GGCTTCGATG CCGACAAAGC GCAGCAGCAG
GTCGCCCAGC AATGGCGCGG CAAACTTGAT CGCGTGCGCA TCAGCGTGCC CGCCGAGGGC
AAGCCGGTGG TCGACACCTT GCGCACGGCG CTGGCGCACA TGCTGATTTC ACGCATCGGC
CCGCGCTTGC AGCCGGGCAC GCGCTCGTAT TCGCGTAGCT GGATCCGCGA CGGCGCAATG
ATTTCCGAAG GCTTGCTGCG GCTTGGCCGC GAAGACGTGG TGCGCGACTA CGTGGATTGG
TTCGCGCCAT ATCAATTTGC CGATGGCATG GTGCCGTGCT GTGTGGACGA CCGCGGCAGC
GACCCGGTGC CGGAGAACGA CAGTCACGGT GAGCTGATCT ACAACATCGC CGAGTACTAC
CGCTACACCG GTGACAAGGC ATTCCTGGAA CAGATGTGGC CGCATGTCAG CGGTGCCTAC
GACTACATGG ACAAGCTGCG CCTCAGCGAA CGCACCGAAG ACAACTTCAT GCGTAACCCG
GCCTTCTACG GAATGATGCC GGTGTCGATC AGCCACGAAG GCTATTCGGC CAAGCCGGTG
CATTCGTACT GGGACAACTT CTGGGCGCTG CGCGGTTATA AGGACGCGGT GATGCTGGCC
GGCGCGCTGG ACAAGCCCGA CGCCGTCGCA CGGTTCAGCG CCGCACGCGA TGAATTCCGT
GGTGACCTGA TTGCCTCGCT GGGTGCGACC GTGCGGCAGC ACACCCTGGA TTTCCTGCCG
GGTTCGGCAG AACTAGGCGA CTTCGATGCG ACCTCGACCA CGATTGCCTT GACGCCAGGC
GGCGAGCAGC AACGTCTGCC GCAGGATCTG CTGACCAAGA CCTTCGAGCG CTATTGGAAA
GAGTTCTCCG ACCGCCGCGA TGGCAAGCGC GACTGGAAGG ACTACACGCC CTACGAGTGG
CGCAACGTGG CCGCATTCGT GCGCCTGGGT TGGCGCGACC GCGCCTGGGA CGCCACCGCG
TTCTTCTTCA ATGATCGTGC GCCGCAACCC TGGAACCAGT GGGCCGAAGT GGTCTCGCGC
ACGCCGCGTA CGCCGTTTTT CGTCGGCGAC CTGCCGCATG CCTGGGTCGC CTCGGACTTC
GTGCGCTCGG TACTGGACAT GTTCGCCTAC GGCCGCGAAT CCGATGCCAG CCTGGTCATC
GCTGCCGGCA CGCCGACGCG GTGGTTCGAA GGCAAGGGCA TTGGCATTGC CGAACTGCGT
ACACCATACG GGCGCCTCAA CTACACCTTG CAGCGCACCG ACAAGCAATT GGTGCTGCAG
CTGCAGCCCG GGCTGATCCT GCCGCCGGGC GGCGTGGTGC TGCCGTGGCC ATATCAAGGC
ACACCGGGCA AGGCCACGGT CAACGGCGAG TCGGCCGAGT GGCAGAACGG CGAACTGCGC
ATCCAGCAAC TGCCCGCCAA CGTGCAAATC GATGTGCCCA GCGCGGTGCG GCGGGCTGAG
CGCGCCACGC AATGA
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| Protein sequence | MTAIAAAGAA QAQERVLDGF NDIGAWRLVV SNQVSGSLRP VATPSGGHAL CLDYNFNGVS
GYVGIRRKLP IEYPDNYRLG LVLRGDSPSN DLQLKLIDAS GDNVWWVNRP GFAFPKNWTT
VSDRKRNIEK AWGPGQDKQL RRSADVEFTI YNKVGGKGTV CLDRLTLTPL PPEDTSPLQA
KAITDTAPAL EQRLADGKPD TFWLSGAVKQ QTVTLDLGKV REFGGAIVQW VPGLQASQYV
VRSSSDGRSW RDLRTVTAGA GGTDWLALPD TEARYLRFDL KDGPNWRYGI KEVQLQPLAF
AATPNDFIKS LAAQLPRGSY PRGFSGEQPY WTILGLDGGT EQGLIGEDGA VEVGKGGFSI
EPFVVTGGKV LHWSDVSSEQ SLQDDYLPIP SVDWHHDLMN LRVTAFVQGT PDQAQLVARY
QLHNTGKEAR DFTLALAVRP FQVNPPAQFL NTLGGVSRID QLAVDGGQVS VNGKPRVFAA
QRPDAGFASA FDSGMDVSHL TAATPPTVTQ VKDETGLASG VLLYRWKLEP GQRREVALVI
PQTGVAQLPA GFDADKAQQQ VAQQWRGKLD RVRISVPAEG KPVVDTLRTA LAHMLISRIG
PRLQPGTRSY SRSWIRDGAM ISEGLLRLGR EDVVRDYVDW FAPYQFADGM VPCCVDDRGS
DPVPENDSHG ELIYNIAEYY RYTGDKAFLE QMWPHVSGAY DYMDKLRLSE RTEDNFMRNP
AFYGMMPVSI SHEGYSAKPV HSYWDNFWAL RGYKDAVMLA GALDKPDAVA RFSAARDEFR
GDLIASLGAT VRQHTLDFLP GSAELGDFDA TSTTIALTPG GEQQRLPQDL LTKTFERYWK
EFSDRRDGKR DWKDYTPYEW RNVAAFVRLG WRDRAWDATA FFFNDRAPQP WNQWAEVVSR
TPRTPFFVGD LPHAWVASDF VRSVLDMFAY GRESDASLVI AAGTPTRWFE GKGIGIAELR
TPYGRLNYTL QRTDKQLVLQ LQPGLILPPG GVVLPWPYQG TPGKATVNGE SAEWQNGELR
IQQLPANVQI DVPSAVRRAE RATQ
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