Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00823 |
Symbol | |
ID | 6305872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 2405706 |
End bp | 2406437 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642639637 |
Product | hypothetical protein |
Protein accession | YP_001913498 |
Protein GI | 188576569 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00889031 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCGCTG CTGCCGCCGC ATTATGCGGG GTGGCAACGG CTGGTTCGGC CAGTGCCGCC GATGCCTTGT CTGCGTCTCC GCTGTCGCCG CTGGGCGCGC CGCGTACCGG TCTGGTCGAG GCGTTGGCGC GCCAGGCGCC GGCGCTGGAC CGTCAAGTGC TGGCCATGGC GACCGAGGCC CTGCAATGCG CCCGGAAGCG TCAGCAGGTC AGTGCCGAGC GCGTGCTCAG CGTCATCGAC TACAGCCGCC CCTCGACCGA GCGCCGCTTA TGGGTGTTCG ATCTGGACAA GCAGCGCCTG TTGTTTCGGG AATGGGTCGC GCATGGCCGC AATACTGGCG AAAACCTGGC GGCGAAGTTT TCCAATAACG ATGGCAGCTT CCAGTCCAGC CTGGGCGCCT TCACCGCGCA GGAGTCGTAC ACCGGGCAAA ACGGCTACTC GTTACGACTC AAGGGCCTGG AGCCGGGGTT CAACGACCAC GCGCGCGACC GCGCCATCGT GATCCACGGC GCGCCCTATG TCAGCGAAGC CATCATCCGC ACCCAGGGCC GGCTCGGCCG CAGCCTGGGT TGTCCGGCCG TGCGGCCAGC GGTGGCCAAG CAGTTGATCG ACACCTTGCG CGACGGTGCG TTCGTATTCG CCTACTACCC GGACCGGGCC TGGCTGCGCC AATCGCGGCT GCTGAGCAGT CGCTGTGGCG GTGCGGCAGC GCGTGCAGTG GCCGGGCGCT GA
|
Protein sequence | MIAAAAALCG VATAGSASAA DALSASPLSP LGAPRTGLVE ALARQAPALD RQVLAMATEA LQCARKRQQV SAERVLSVID YSRPSTERRL WVFDLDKQRL LFREWVAHGR NTGENLAAKF SNNDGSFQSS LGAFTAQESY TGQNGYSLRL KGLEPGFNDH ARDRAIVIHG APYVSEAIIR TQGRLGRSLG CPAVRPAVAK QLIDTLRDGA FVFAYYPDRA WLRQSRLLSS RCGGAAARAV AGR
|
| |