Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00345 |
Symbol | |
ID | 6305515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 2054552 |
End bp | 2054917 |
Gene Length | 366 bp |
Protein Length | 121 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642639283 |
Product | cupin domain protein |
Protein accession | YP_001913155 |
Protein GI | 188576226 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0662] Mannose-6-phosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00219915 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGTGA TCAGCACCGA CACGGCAGAG CATTATCCCT GGGGCGACGC TTGCGAGGGC TGGCACCTGT TACGCGATCC CAACCTCAAC GTGCTCGAAG AGCACATGCC GCCGGGTGTG TCGGAATTGC GCCATCGGCA TAGCCGTGCG CGGCACTTCT TCTATGTACT GGCCGGCGAG GTGATGTTGA AGCTGGATGG CGCACAACAT GTGCTGCGGG TCGGGCAGAG TTTGCACGTG CCGCCGGGCT CCACGCACCA GGTGCACACT CTCTCGGACG TGGAAGCGCG CTTTCTGGTG ATTTCCGCAC CGCACGGTCG TAACGAACGC ACACCTGCGG CTGTGCGCAA CAAGGATACA GTCTGA
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Protein sequence | MAVISTDTAE HYPWGDACEG WHLLRDPNLN VLEEHMPPGV SELRHRHSRA RHFFYVLAGE VMLKLDGAQH VLRVGQSLHV PPGSTHQVHT LSDVEARFLV ISAPHGRNER TPAAVRNKDT V
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