Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00189 |
Symbol | |
ID | 6305163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 1683560 |
End bp | 1685281 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642638934 |
Product | ABC transporter ATP-binding protein |
Protein accession | YP_001912810 |
Protein GI | 188575881 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.226248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGCGC AGCAGCGCAT GCGCACCGTG CTGCATCACT TCGTGAGCAC CCTGGTGCCG GCAGACATGC CGACGATTGC ACTTTACGTC GCGTTATCGT TGGCCGCCGC ATTGGTCGGC AGCATCGTGG CGGTGTGCCT GCTGCCGCTG GTGCAGCCCG GCCATGGCGT GCAACTGGCT GGCTATCGCT TGGCATTACC GGGCGGACTA GCCATGCAGG CAGGCATGTT TGTGGGGGTG AGCCTGCTGT TTGCCGCATT GCGCTGGCAG AGCGCACGGC TGGCCGCACG CTTGACCAGC CGCTATGCCA TCGGCCTGCG CGGACGCGTG CATGCGGCAC TGATCGACGC GCCATTGCCT GCCTTGTCCG GTGCCAGCTC GGCAGAAATC GCCAATGTGC TCACCTACAA CATCGAGATC GCCACGCAAG GCTTTAGCGC GGTGCTGCAG CTGTTGGTCG CGGCGATCAC TGCGCTGGTG AGCGTGTGCA TCGCGGTGCT GATCGCCCCT GCGCTGTTGA TCGCCACACC GCTGCTGGCG GTTCTGGCGT GCTTGGGCGT GCGTATGTCC AGCAGCGATG CACAGGCGCG CATCAGCCGT GCCTATGTGG CGGACATGAC GCAGCTGTTC TGGCTGAGCG AAGATTTTCC GCGTCGTTTG CGCCACGTGC GTTCGTTTCA GCGCGAAAAC GTCGAGAGCA CGCATTACGA ACGCATTTCG GCGCGATTGG GGCACGGGTA TGCGCAACAG CAGGAACTGG TTGCCGGCAG TCGACTGCTG CTCGAGCTCA CTGCGGTGGT CGCCATCGCC GGCATTCTGG TGTTGGCCAA TCGCTGGCAG GGTGCCGATC GCGCCGCGCT GATCACCGTC AGTCTGTTGC TGGGCCGTTT GCTGCCGTAC CTGGTCACCA CGCGGCAAAG CGTGCAGCAA TTGCGTTCGG CATGGCCGGC GCTGCAGCTG TGGCGCCGCT ATGTGGACCT TGGCGTTGCG CGTGCACATG CGCCGGAACA AACGGCCGAG CCACTGCCGG CCACACTGCA TATCGAACAC ATCGGGCTGG CGTCGCCGTT ACCCCAGCTC GCGCTCGAGT CGATGTGGCT GGTGCCAGGT CAGATGATGC TAGTGGTCGG CGCCTCCGGC GTGGGGAAGA GCAGTCTGAT GGATGTGCTT TCCGGTCAGA CACCGCCGGC GCAGTTCGTT GCGCACATGT GCGGGCGCCG GCTGACGTTT TCCGCGTATC GACATCTGGT GCGACACAGC GCCTACATCG GCCAAGGCGT ACGGCCGTGG CAGCGCACGG TGCGCGATTG CCTGCAGTGG GTGCTGCCCG GAGCTTCCGA TGCACGCATG TGGGAGGTGC TGGCCGACGT TGGCCTGTGT TCGCGGCTGC AGCGCGATGC GCAAGGCCTG GACACGCCGA TCGACGCGCA GGACGGGCGC CTGTCCGGCG GCGAATCGCA ACGCCTGTTG CTGGCGCAGG TGCTGCTGCG TCGGCCGACC CTGGCGGTGT TGGACGAAGC CACTAGCGCG CTGGACGCCG ATGCGGAACA TCAGGTGCTA AGCACCTTGC GCGCGCGTCT GCCGACTACC GTGCTGTTGG TGGTTTCGCA TCGCACCAGC TTGGCCGCCG TGGCGGATCG CACGGTGAAC CTGAATGGTA CGCCTGTTCG GCGGATGCAT ATGAGTTCGT CGGAAATGGC CACACCGTAC GACGTGCGCT AG
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Protein sequence | MTAQQRMRTV LHHFVSTLVP ADMPTIALYV ALSLAAALVG SIVAVCLLPL VQPGHGVQLA GYRLALPGGL AMQAGMFVGV SLLFAALRWQ SARLAARLTS RYAIGLRGRV HAALIDAPLP ALSGASSAEI ANVLTYNIEI ATQGFSAVLQ LLVAAITALV SVCIAVLIAP ALLIATPLLA VLACLGVRMS SSDAQARISR AYVADMTQLF WLSEDFPRRL RHVRSFQREN VESTHYERIS ARLGHGYAQQ QELVAGSRLL LELTAVVAIA GILVLANRWQ GADRAALITV SLLLGRLLPY LVTTRQSVQQ LRSAWPALQL WRRYVDLGVA RAHAPEQTAE PLPATLHIEH IGLASPLPQL ALESMWLVPG QMMLVVGASG VGKSSLMDVL SGQTPPAQFV AHMCGRRLTF SAYRHLVRHS AYIGQGVRPW QRTVRDCLQW VLPGASDARM WEVLADVGLC SRLQRDAQGL DTPIDAQDGR LSGGESQRLL LAQVLLRRPT LAVLDEATSA LDADAEHQVL STLRARLPTT VLLVVSHRTS LAAVADRTVN LNGTPVRRMH MSSSEMATPY DVR
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