| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00029 |
|---|
| Symbol | |
|---|
| ID | 6305320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 1842110 |
|---|
| End bp | 1843132 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642639090 |
|---|
| Product | chemotaxis protein |
|---|
| Protein accession | YP_001912963 |
|---|
| Protein GI | 188576034 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0835] Chemotaxis signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.377111 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACC CCACCGCCAA CGGTGAGCTG GACGATTATC TGGAAGACCT GCTGCACGAT
GCCGGTGTCG AGATCGTCGC CCCGCCTGCT GCGGTCGCTG TCGAAGCAGC GGCGCTTGCG
CACGCGGATC TCGCGCTGGC CGAGCCGCCG GTGCAGGCTG CCGCCCTTCC CGAAGCTGCC
GCTGTCCCCG AAGCCGCCAC CTCCAACGCA ATTGCCGCGG TGCTGAGCGC CGACGCGATC
GCTGCCGATT TCCTGGCCGA GATGGATGCC GACCCGGCAT TCGGCCCGCC CGTGCTCGCC
GCGCCCAGCG CTGCCGACAT CGCCGCCGAT TTCCTCGCCG AAATGGATGC GGACCCGGCC
TTCGGTACCG CACCCACGGC AGTCGACCTG CTCACCGCCG ATCTGCTGGC AGAAATGGAT
GCCGACCCGG CCTTCGGGCT GGAGACCGCA CCGGTTGCCG TCCCCGCACC TGCCCCGGCA
CCGAAACCGG CACCCCATGC AGCGCCTGCA CCGATGCGCC CTGCACCGGC ACCTACCGGG
CTGCAGGCAC TGCTGGCGCC CGACCAGGCC GACAAGATCC ACGCCGAACG CCGTGCCAGC
GAACGCAGCA CACGTTGGTT GCGTCTGCGC TGCGGCGAAC AGACCTATGC ACTGGAATTG
CTCAAGGTGC AGGAAGTGGT CTTGCCAGTA CCGCTACTGC CGTTGCGCGG CACCGCCAGC
GCGATGCTTG GCATCATGAA CCTGCGTGGC CAGGTGGTGC CGGTGATCGA TCTGGGCGTC
CATCTGGGCT CTTCGCCGGT AGATATGGAT CTGCACACCC GCGTGGTGGT GCTGGAAGAG
AACGGCGAAA CCATGGGCCT GCGCGTGTCG GCCGTGGAAG ACGTCACCAG CCTGACCGAT
CAGCAGATCG AGCCGCCAGA CAACGCACGC CTGTGCCGCA TTTACAACAA CCTGTTCCGC
GGTGTCGCAC GCCTGGGCCA TCAGCCGATG ATCCTGCTCG ATGCCACCCA TCTGCTGCAT
TGA
|
|---|
| Protein sequence | MSNPTANGEL DDYLEDLLHD AGVEIVAPPA AVAVEAAALA HADLALAEPP VQAAALPEAA
AVPEAATSNA IAAVLSADAI AADFLAEMDA DPAFGPPVLA APSAADIAAD FLAEMDADPA
FGTAPTAVDL LTADLLAEMD ADPAFGLETA PVAVPAPAPA PKPAPHAAPA PMRPAPAPTG
LQALLAPDQA DKIHAERRAS ERSTRWLRLR CGEQTYALEL LKVQEVVLPV PLLPLRGTAS
AMLGIMNLRG QVVPVIDLGV HLGSSPVDMD LHTRVVVLEE NGETMGLRVS AVEDVTSLTD
QQIEPPDNAR LCRIYNNLFR GVARLGHQPM ILLDATHLLH
|
|---|
| |