Gene PSPTO_5583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5583 
Symbol 
ID1187275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp6361325 
End bp6362011 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content52% 
IMG OID637396898 
ProductAis protein, putative 
Protein accessionNP_795303 
Protein GI28872684 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCACATA CATTTATTCA TGACCAAGGT GAGCCCAAAA CAAGCTTTGG CTCACTTCAT 
CTTGTCAACT GGCGCACATT GTTTGCGGTT TTCTCGTTAA TGCTAACCAC AACGTTGATC 
TGGTTTTCGA CCACGGCCCA GGTTTCCGAC TTGGCTAGTG GCAAAAATCT TGTCACCTCG 
GGGCTTGTCG AGCAATGGAG ACATGGTGAT GTAGTGGTCA TGATCAGGCA CGCGGAACGC 
TGTGACCGAT CTGCAAATAG CTGTCTCGGC AGTCCTGACG GCATTACGGT GAACGGTAGC 
CATGCGGCGT CTGATGTAGG TGAGGGGCTG CGAAGGTTAG GGCTTGATCG GACCCAGCTG 
ATCGCCAGCC CATTGACTCG TACGCAGCAG ACGGCAAATT ACATCGCGGG ACAAGCAGTA 
GTCCCTCAGG GCTGGGCTGG GGACTGTAAC AATCACTTCA AGGATGCAGT CGTTGCCCAC 
AAAATAAAAG GGGAAAACCT GGTGTTGATA ACCCACAGCG GTTGTATCGA TCATTTCGAG 
CGAACCATGG GGGTGCCTGC AGGGGAGCGG TCTAGCGAAT ACGCTGAGGC ATTCTTTGTA 
AAAATGGACG GCAAGTCGAC CCCCAGAATT CTTGGCTCAT TGAATGCGGT GCAGTGGAAG 
AGCTTGGCCA ACGACCAGCT TAAGTAA
 
Protein sequence
MSHTFIHDQG EPKTSFGSLH LVNWRTLFAV FSLMLTTTLI WFSTTAQVSD LASGKNLVTS 
GLVEQWRHGD VVVMIRHAER CDRSANSCLG SPDGITVNGS HAASDVGEGL RRLGLDRTQL 
IASPLTRTQQ TANYIAGQAV VPQGWAGDCN NHFKDAVVAH KIKGENLVLI THSGCIDHFE 
RTMGVPAGER SSEYAEAFFV KMDGKSTPRI LGSLNAVQWK SLANDQLK