| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5413 |
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| Symbol | |
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| ID | 1187100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6149242 |
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| End bp | 6151620 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637396730 |
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| Product | EF hand domain protein |
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| Protein accession | NP_795140 |
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| Protein GI | 28872521 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCTGT TGCCGTTTGC GCGTTACCCC TTATCACCTG CAGAAACACC TAAACCCAAG
GTGACCATGA AGGTTGGAGA TTTCAGGGCT TACGACACCG CTCCAGCACC CGGAGTGACC
ACTGCGTCCT GCGGACAACT GGCAATCGGC ACCAAGTTAG AAATCATCGA GACCGCCGAG
AATGGCGAAC TTACTTATGC CAAGGGTAAG ATTCTATCTG GCAGCGTGAA GCAGGGGGCA
ACCAAAAAAC GGGTCGAGGG GGCGGAGGTC TGGTTCGCTT ATTTGAAAAA CGGCGAACCC
TACAAAAACT CAGTCCCTAA GCGCATCTGG CTCGCTGACG ATGTGCCTGA GCGAGCAAGA
CCCAATTACT GGCAGGGTAA GGTCAAAGCC TCAGTAGTGA ATAAGTTGCC GCTGTACGAT
GATCCTGCCA GCCCTACAAA TGGCCAGCCT GCAGGCGCCC GGAAGGGGAC TCTGGAGCTG
GTCATGAACA GCGTCATCGA GTTTAACTCT TCGGAAGTCG TCAACCTGGC GCTGGATGGC
AAGCTGCATC GGATGGCCAA GTGCACGATG CTGAGTGGCG GCCTGCGGGG TCATGGTGCG
GTTCCCCCCA GCTTTTGGGC ATGTGTTGAA AATGACCCTG CTAATAAAGT ATTGAAATGG
GACTCGGTAA CGCCGACCAG TTTTGATACG GTCGTTATGA CGAGCACCGG AGTGAAGGCG
GGCGATCCAA TTGGCTATCT TGGACAAACC GAAAATCTCA CCGGTGAAAA TGGCGGCGTC
AGCAGCAAAT ACCAGGTTCA CGTCGAAATT TTCACAGCCG ATGCTGAGGT TAAAGACTTC
CTCAAGAACA CCGCGGGTTT GAAGATTGGG AAGCAATACC TGCACCTTGC AAGCGGGGCT
GTACTCAAGC AAAAAGCGCC CGCGACCGGC ACCACAGCAC TCAAGCAAGA CCATGCGGTT
GACTTGGCTA AAGCCACAAT TGTCAAAGAA GGCACCGATG ACTGGTATGA GGTCAGCGTG
ATCGAGGACG ATCAGCCTGT AGCCGGCCTG ATAAAAAAAG CCACTGCGCT AGTCATCACA
CAGCACGATT GGGAAAAATT GGGCTTTCAG ATCGTAGAGG AGAACAACGC AGCAGCCGAT
GGTTTCTTGG ACCCGGATGC AATGCCACAG TTCTTCAAAG ACCTATTCGC GAAGATCGAC
AAGAACCACG ATGGTGAGGT GGAGCCTGCT GAACTGGCTG AGGCTCTTAA GAAACCGGAA
ACCAGAACCC AGTGGGCCAG GCTTGTTGCC CATCACCCTA CGGAGTGGAA AGATAAGGCA
GGCTCCCCCA AGTGGAGCAA GTTGGATAAA CTGCTGGAAA CGTCGCCGAA GATGTTGAAA
CATGAAAAAG AACGCATTGA TAAATATGTA TTTTGGGATG AGTTGTCAGG GAAAGCTAAG
ATGACCTCAA GTTTAATATG GCATTTTCAT CCGGTAGAAT TCATTTCAAC ATTTAGCGCA
AAAAAAGTCT GCGCTTGCAA CGCCATAGTT AAGGCTACTC GCTGGGTTTC TTCCAGTAAG
ACGCACTATG GCCCATTGCA TACGGGTGAT AAAGAGCTTG GGAGTGCACC TCAGTGGGAT
GACCTGGTCT CAGAAGGAAA AATAACGGAA GAGGAGAAAA AAATTATTGT TGTAATGTCT
GGAAACGAGG CAAAAATTAA CGGAGTACAA AGTTATGATA GCGAAATAAT TACTGCCGGC
GCGATGCAGA AAACAATTAA CTTGTCCGGT GGCGGTGAGC TGCCACTACA AGTTAAGAAG
TTTAAAAATC AGCATCCCGA GGCGTACATC GAATACTTTG ATTCTCAAGG CTGGAAGTTG
GATGAGACAG GTGATTCGGC GAAAATGTAT TATCAAGGGC CGGCTCGAGC TAGTGGCGCA
AAGCTGGAAG GAAAGGCGCT GAAGGATAAT TTAAAAATTG GTTGCAGTGA ATCGACATTT
GGGAAGGTGG TTGACTGTCA ACCTGTTTCA GTGATGGCCT GCGCTATCGC AAGTCCGTTA
TATATCCAGA TACAAATAAT GGATTTTATA GAAAGGTTAC GTAGTTCTTT AACGAAGAAG
CCCACAGGCT ATAACTTTAC TGCTGGGGGA TTTTTCAAGA CCTCTCTCGG AAAAGCTGTG
GTTTTGGATC ACGATATAAA TCGACCCGGG TATGTGAAGG ATGACTTGGG ATCTGCTCTT
GACACTTTTT TTGCTCAAAA TCCAACAGTC AGCCGGGATA TTGATACATG GGGCGCAGCA
TATAGCGTTA ATGAGCGAAA AGTTTTAGAC CTGTATGGCG CTCGAAGAAG AATGACCAAT
GCATTGCTTC GATACAATCA CTTGAAGGCG GAGTTATAA
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| Protein sequence | MHLLPFARYP LSPAETPKPK VTMKVGDFRA YDTAPAPGVT TASCGQLAIG TKLEIIETAE
NGELTYAKGK ILSGSVKQGA TKKRVEGAEV WFAYLKNGEP YKNSVPKRIW LADDVPERAR
PNYWQGKVKA SVVNKLPLYD DPASPTNGQP AGARKGTLEL VMNSVIEFNS SEVVNLALDG
KLHRMAKCTM LSGGLRGHGA VPPSFWACVE NDPANKVLKW DSVTPTSFDT VVMTSTGVKA
GDPIGYLGQT ENLTGENGGV SSKYQVHVEI FTADAEVKDF LKNTAGLKIG KQYLHLASGA
VLKQKAPATG TTALKQDHAV DLAKATIVKE GTDDWYEVSV IEDDQPVAGL IKKATALVIT
QHDWEKLGFQ IVEENNAAAD GFLDPDAMPQ FFKDLFAKID KNHDGEVEPA ELAEALKKPE
TRTQWARLVA HHPTEWKDKA GSPKWSKLDK LLETSPKMLK HEKERIDKYV FWDELSGKAK
MTSSLIWHFH PVEFISTFSA KKVCACNAIV KATRWVSSSK THYGPLHTGD KELGSAPQWD
DLVSEGKITE EEKKIIVVMS GNEAKINGVQ SYDSEIITAG AMQKTINLSG GGELPLQVKK
FKNQHPEAYI EYFDSQGWKL DETGDSAKMY YQGPARASGA KLEGKALKDN LKIGCSESTF
GKVVDCQPVS VMACAIASPL YIQIQIMDFI ERLRSSLTKK PTGYNFTAGG FFKTSLGKAV
VLDHDINRPG YVKDDLGSAL DTFFAQNPTV SRDIDTWGAA YSVNERKVLD LYGARRRMTN
ALLRYNHLKA EL
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